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新型铁介导的人 J 蛋白伴侣分子 Dph4 分子伴侣功能的结构和机制见解。

Structure and mechanistic insights into novel iron-mediated moonlighting functions of human J-protein cochaperone, Dph4.

机构信息

Department of Biochemistry, Indian Institute of Science, Bangalore 560012, India.

出版信息

J Biol Chem. 2012 Apr 13;287(16):13194-205. doi: 10.1074/jbc.M112.339655. Epub 2012 Feb 24.

Abstract

J-proteins are obligate cochaperones of Hsp70s and stimulate their ATPase activity via the J-domain. Although the functions of J-proteins have been well understood in the context of Hsp70s, their additional co-evolved "physiological functions" are still elusive. We report here the solution structure and mechanism of novel iron-mediated functional roles of human Dph4, a type III J-protein playing a vital role in diphthamide biosynthesis and normal development. The NMR structure of Dph4 reveals two domains: a conserved J-domain and a CSL-domain connected via a flexible linker-helix. The linker-helix modulates the conformational flexibility between the two domains, regulating thereby the protein function. Dph4 exhibits a unique ability to bind iron in tetrahedral coordination geometry through cysteines of its CSL-domain. The oxidized Fe-Dph4 shows characteristic UV-visible and electron paramagnetic resonance spectral properties similar to rubredoxins. Iron-bound Dph4 (Fe-Dph4) also undergoes oligomerization, thus potentially functioning as a transient "iron storage protein," thereby regulating the intracellular iron homeostasis. Remarkably, Fe-Dph4 exhibits vital redox and electron carrier activity, which is critical for important metabolic reactions, including diphthamide biosynthesis. Further, we observed that Fe-Dph4 is conformationally better poised to perform Hsp70-dependent functions, thus underlining the significance of iron binding in Dph4. Yeast Jjj3, a functional ortholog of human Dph4 also shows a similar iron-binding property, indicating the conserved nature of iron sequestration across species. Taken together, our findings provide invaluable evidence in favor of additional co-evolved specialized functions of J-proteins, previously not well appreciated.

摘要

J 蛋白是 Hsp70 的必需共伴侣,通过 J 结构域刺激其 ATP 酶活性。尽管 J 蛋白在 Hsp70 背景下的功能已经得到很好的理解,但它们额外共进化的“生理功能”仍然难以捉摸。我们在这里报告了新型铁介导的人 Dph4 功能作用的溶液结构和机制,Dph4 是一种在二氢尿嘧啶生物合成和正常发育中起关键作用的 III 型 J 蛋白。Dph4 的 NMR 结构揭示了两个结构域:一个保守的 J 结构域和一个通过柔性连接 - 螺旋连接的 CSL 结构域。连接 - 螺旋调节两个结构域之间的构象灵活性,从而调节蛋白质功能。Dph4 具有通过其 CSL 结构域中的半胱氨酸以四面配位几何形状结合铁的独特能力。氧化的 Fe-Dph4 表现出与 rubredoxins 相似的特征紫外可见和电子顺磁共振光谱特性。铁结合的 Dph4(Fe-Dph4)也发生寡聚化,因此可能作为一种瞬时“铁储存蛋白”,从而调节细胞内铁稳态。值得注意的是,Fe-Dph4 表现出重要的氧化还原和电子载体活性,这对于包括二氢尿嘧啶生物合成在内的重要代谢反应至关重要。此外,我们观察到 Fe-Dph4 更适合执行 Hsp70 依赖性功能,因此强调了铁结合在 Dph4 中的重要性。酵母 Jjj3,人 Dph4 的功能同源物也表现出类似的铁结合特性,表明铁螯合在物种间具有保守性。总之,我们的发现为 J 蛋白以前未被充分认识的额外共进化的专门功能提供了宝贵的证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b956/3339945/e0923eb0bfb5/zbc0171204860001.jpg

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