Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ 08544, USA.
Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4365-70. doi: 10.1073/pnas.1116167109. Epub 2012 Mar 5.
The drying of hydrophobic cavities is believed to play an important role in biophysical phenomena such as the folding of globular proteins, the opening and closing of ligand-gated ion channels, and ligand binding to hydrophobic pockets. We use forward flux sampling, a molecular simulation technique, to compute the rate of capillary evaporation of water confined between two hydrophobic surfaces separated by nanoscopic gaps, as a function of gap, surface size, and temperature. Over the range of conditions investigated (gaps between 9 and 14 Å and surface areas between 1 and 9 nm(2)), the free energy barrier to evaporation scales linearly with the gap between hydrophobic surfaces, suggesting that line tension makes the predominant contribution to the free energy barrier. The exponential dependence of the evaporation rate on the gap between confining surfaces causes a 10 order-of-magnitude decrease in the rate when the gap increases from 9 to 14 Å. The computed free energy barriers are of the order of 50 kT and are predominantly enthalpic. Evaporation rates per unit area are found to be two orders of magnitude faster in confinement by the larger (9 nm(2)) than by the smaller (1 nm(2)) surfaces considered here, at otherwise identical conditions. We show that this rate enhancement is a consequence of the dependence of hydrophobic hydration on the size of solvated objects. For sufficiently large surfaces, the critical nucleus for the evaporation process is a gap-spanning vapor tube.
疏水性空腔的干燥被认为在生物物理现象中起着重要作用,如球状蛋白质的折叠、配体门控离子通道的开启和关闭,以及配体与疏水性口袋的结合。我们使用正向通量采样,一种分子模拟技术,来计算水在两个疏水性表面之间的毛细蒸发速率,这两个疏水性表面由纳米级间隙隔开,作为间隙、表面尺寸和温度的函数。在所研究的条件范围内(间隙在 9 到 14 Å 之间,表面面积在 1 到 9 nm²之间),蒸发的自由能势垒与疏水性表面之间的间隙呈线性关系,表明线张力对自由能势垒有主要贡献。限制表面之间的间隙对蒸发速率的指数依赖性导致当间隙从 9 Å 增加到 14 Å 时,速率下降了 10 个数量级。计算出的自由能势垒约为 50 kT,主要是焓。在相同条件下,与较小(1 nm²)的表面相比,通过较大(9 nm²)的表面限制时,单位面积的蒸发速率快两个数量级。我们表明,这种速率增强是疏水水合作用对溶剂化物体大小的依赖性的结果。对于足够大的表面,蒸发过程的临界核是一个跨越间隙的蒸汽管。