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2
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Direct evidence for specific interactions of the fibrinogen alphaC-domains with the central E region and with each other.纤维蛋白原αC结构域与中央E区域以及它们彼此之间特定相互作用的直接证据。
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Structure, stability, and interaction of fibrin αC-domain polymers.纤维蛋白 αC 结构域聚合物的结构、稳定性和相互作用。
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Missing regions within the molecular architecture of human fibrin clots structurally resolved by XL-MS and integrative structural modeling.通过 XL-MS 和综合结构建模解析的人纤维蛋白凝块分子结构中的缺失区域。
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Oxidation-induced destabilization of the fibrinogen αC-domain dimer investigated by molecular dynamics simulations.通过分子动力学模拟研究氧化诱导的纤维蛋白原 αC 结构域二聚体的不稳定性。
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本文引用的文献

1
Structure, stability, and interaction of fibrin αC-domain polymers.纤维蛋白 αC 结构域聚合物的结构、稳定性和相互作用。
Biochemistry. 2011 Sep 20;50(37):8028-37. doi: 10.1021/bi2008189. Epub 2011 Aug 24.
2
Interactions between factor XIII and the alphaC region of fibrinogen.因子 XIII 与纤维蛋白原的 alphaC 区域之间的相互作用。
Blood. 2011 Mar 24;117(12):3460-8. doi: 10.1182/blood-2010-10-313601. Epub 2011 Jan 11.
3
Noncovalent interaction of alpha(2)-antiplasmin with fibrin(ogen): localization of alpha(2)-antiplasmin-binding sites.α2-抗纤溶酶与纤维蛋白(原)的非共价相互作用:α2-抗纤溶酶结合位点的定位。
Biochemistry. 2010 Sep 7;49(35):7643-51. doi: 10.1021/bi1010317.
4
Structure, stability, and interaction of the fibrin(ogen) alphaC-domains.纤维蛋白原αC 结构域的结构、稳定性和相互作用。
Biochemistry. 2009 Dec 29;48(51):12191-201. doi: 10.1021/bi901640e.
5
Recommendations for nomenclature on fibrinogen and fibrin.纤维蛋白原和纤维蛋白命名建议。
J Thromb Haemost. 2009 Feb;7(2):355-9. doi: 10.1111/j.1538-7836.2008.03242.x. Epub 2008 Nov 25.
6
Crystal structures of fibronectin-binding sites from Staphylococcus aureus FnBPA in complex with fibronectin domains.金黄色葡萄球菌FnBPA的纤连蛋白结合位点与纤连蛋白结构域复合物的晶体结构。
Proc Natl Acad Sci U S A. 2008 Aug 26;105(34):12254-8. doi: 10.1073/pnas.0803556105. Epub 2008 Aug 19.
7
Direct evidence for specific interactions of the fibrinogen alphaC-domains with the central E region and with each other.纤维蛋白原αC结构域与中央E区域以及它们彼此之间特定相互作用的直接证据。
Biochemistry. 2007 Aug 7;46(31):9133-42. doi: 10.1021/bi700944j. Epub 2007 Jul 13.
8
NMR solution structure, stability, and interaction of the recombinant bovine fibrinogen alphaC-domain fragment.重组牛纤维蛋白原αC结构域片段的核磁共振溶液结构、稳定性及相互作用
Biochemistry. 2007 Jul 24;46(29):8550-60. doi: 10.1021/bi700606v. Epub 2007 Jun 23.
9
Molecular weight fibrinogen variants determine angiogenesis rate in a fibrin matrix in vitro and in vivo.分子量纤维蛋白原变体在体外和体内的纤维蛋白基质中决定血管生成速率。
J Thromb Haemost. 2006 Sep;4(9):1975-81. doi: 10.1111/j.1538-7836.2006.02081.x.
10
Fibronectin-binding proteins of gram-positive cocci.革兰氏阳性球菌的纤连蛋白结合蛋白
Microbes Infect. 2006 Jul;8(8):2291-8. doi: 10.1016/j.micinf.2006.03.011. Epub 2006 May 30.

在纤维蛋白中αC 聚合物形成的机制。

On the mechanism of αC polymer formation in fibrin.

机构信息

Center for Vascular and Inflammatory Diseases and the Department of Biochemistry, University of Maryland School of Medicine, Baltimore, Maryland 21201, United States.

出版信息

Biochemistry. 2012 Mar 27;51(12):2526-38. doi: 10.1021/bi2017848. Epub 2012 Mar 15.

DOI:10.1021/bi2017848
PMID:22397628
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3343699/
Abstract

Our previous studies revealed that the fibrinogen αC-domains undergo conformational changes and adopt a physiologically active conformation upon their self-association into αC polymers in fibrin. In the present study, we analyzed the mechanism of αC polymer formation and tested our hypothesis that self-association of the αC-domains occurs through the interaction between their N-terminal subdomains and may include β-hairpin swapping. Our binding experiments performed by size-exclusion chromatography and optical trap-based force spectroscopy revealed that the αC-domains self-associate exclusively through their N-terminal subdomains, while their C-terminal subdomains were found to interact with the αC-connectors that tether the αC-domains to the bulk of the molecule. This interaction should reinforce the structure of αC polymers and provide the proper orientation of their reactive residues for efficient cross-linking by factor XIIIa. Molecular modeling of self-association of the N-terminal subdomains confirmed that the hypothesized β-hairpin swapping does not impose any steric hindrance. To "freeze" the conformation of the N-terminal subdomain and prevent the hypothesized β-hairpin swapping, we introduced by site-directed mutagenesis an extra disulfide bond between two β-hairpins of the bovine Aα406-483 fragment corresponding to this subdomain. The experiments performed by circular dichroism revealed that Aα406-483 mutant containing Lys429Cys/Thr463Cys mutations preserved its β-sheet structure. However, in contrast to wild-type Aα406-483, this mutant had lower tendency for oligomerization, and its structure was not stabilized upon oligomerization, in agreement with the above hypothesis. On the basis of the results obtained and our previous findings, we propose a model of fibrin αC polymer structure and molecular mechanism of assembly.

摘要

我们之前的研究表明,纤维蛋白原 αC 结构域在自身聚合形成 αC 聚合物时会发生构象变化,并呈现出生理活性构象。在本研究中,我们分析了 αC 聚合物形成的机制,并验证了我们的假设,即 αC 结构域的自组装是通过它们的 N 端亚结构域之间的相互作用发生的,并且可能包括 β 发夹交换。我们通过大小排阻色谱和基于光阱的力谱学进行的结合实验表明,αC 结构域仅通过它们的 N 端亚结构域自组装,而它们的 C 端亚结构域被发现与将 αC 结构域连接到分子主体的 αC 接头相互作用。这种相互作用应该加强 αC 聚合物的结构,并为其反应性残基的有效交联提供正确的取向因子 XIIIa。N 端亚结构域自组装的分子建模证实,假设的 β 发夹交换不会造成任何空间位阻。为了“冻结”N 端亚结构域的构象并防止假设的 β 发夹交换,我们通过定点突变在牛 Aα406-483 片段的两个 β 发夹之间引入了一个额外的二硫键,该片段对应于这个亚结构域。圆二色性实验表明,含有 Lys429Cys/Thr463Cys 突变的 Aα406-483 突变体保留了其β-折叠结构。然而,与野生型 Aα406-483 相比,该突变体的寡聚化倾向较低,并且其结构在寡聚化后不稳定,这与上述假设一致。基于获得的结果和我们之前的发现,我们提出了纤维蛋白原 αC 聚合物结构和组装分子机制的模型。