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正反馈环对驱动哺乳动物细胞周期的细胞周期蛋白依赖性激酶网络中振荡鲁棒性的影响。

Effect of positive feedback loops on the robustness of oscillations in the network of cyclin-dependent kinases driving the mammalian cell cycle.

机构信息

Faculté des Sciences, Université Libre de Bruxelles (ULB), Belgium.

出版信息

FEBS J. 2012 Sep;279(18):3411-31. doi: 10.1111/j.1742-4658.2012.08585.x. Epub 2012 May 8.

DOI:10.1111/j.1742-4658.2012.08585.x
PMID:22458764
Abstract

The transitions between the G(1), S, G(2) and M phases of the mammalian cell cycle are driven by a network of cyclin-dependent kinases (Cdks), whose sequential activation is regulated by intertwined negative and positive feedback loops. We previously proposed a detailed computational model for the Cdk network, and showed that this network is capable of temporal self-organization in the form of sustained oscillations, which govern ordered progression through the successive phases of the cell cycle [Gérard and Goldbeter (2009) Proc Natl Acad Sci USA 106, 21643-21648]. We subsequently proposed a skeleton model for the cell cycle that retains the core regulatory mechanisms of the detailed model [Gérard and Goldbeter (2011) Interface Focus 1, 24-35]. Here we extend this skeleton model by incorporating Cdk regulation through phosphorylation/dephosphorylation and by including the positive feedback loops that underlie the dynamics of the G(1)/S and G(2)/M transitions via phosphatase Cdc25 and via phosphatase Cdc25 and kinase Wee1, respectively. We determine the effects of these positive feedback loops and ultrasensitivity in phosphorylation/dephosphorylation on the dynamics of the Cdk network. The multiplicity of positive feedback loops as well as the existence of ultrasensitivity promote the occurrence of bistability and increase the amplitude of the oscillations in the various cyclin/Cdk complexes. By resorting to stochastic simulations, we further show that the presence of multiple, redundant positive feedback loops in the G(2)/M transition of the cell cycle markedly enhances the robustness of the Cdk oscillations with respect to molecular noise.

摘要

哺乳动物细胞周期的 G(1)、S、G(2)和 M 期之间的转变是由细胞周期蛋白依赖性激酶 (Cdk) 网络驱动的,其顺序激活受交织的负反馈和正反馈回路调节。我们之前提出了一个 Cdk 网络的详细计算模型,并表明该网络能够以持续振荡的形式进行时间自组织,这种自组织控制着细胞周期中连续阶段的有序进展[Gérard 和 Goldbeter (2009) Proc Natl Acad Sci USA 106, 21643-21648]。随后,我们提出了一个保留详细模型核心调节机制的细胞周期骨架模型[Gérard 和 Goldbeter (2011) Interface Focus 1, 24-35]。在这里,我们通过将 Cdk 的磷酸化/去磷酸化调节以及通过磷酸酶 Cdc25 和通过磷酸酶 Cdc25 和激酶 Wee1 分别为 G(1)/S 和 G(2)/M 转变提供动力的正反馈回路来扩展这个骨架模型。我们确定了这些正反馈回路和磷酸化/去磷酸化中的超敏性对 Cdk 网络动力学的影响。正反馈回路的多重性以及超敏性的存在促进了双稳态的发生,并增加了各种细胞周期蛋白/Cdk 复合物中振荡的幅度。通过随机模拟,我们进一步表明,细胞周期 G(2)/M 转变中多个冗余的正反馈回路的存在显著增强了 Cdk 振荡对分子噪声的稳健性。

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