布氏锥虫基因组品系 Trypanosoma brucei brucei TREU 927、T. b. gambiense DAL 972、T. vivax Y486 和 T. congolense IL3000 的起源。
The origins of the trypanosome genome strains Trypanosoma brucei brucei TREU 927, T. b. gambiense DAL 972, T. vivax Y486 and T. congolense IL3000.
机构信息
School of Biological Sciences, University of Bristol, Bristol BS8 1UG, UK.
出版信息
Parasit Vectors. 2012 Apr 7;5:71. doi: 10.1186/1756-3305-5-71.
Abstract
The genomes of several tsetse-transmitted African trypanosomes (Trypanosoma brucei brucei, T. b. gambiense, T. vivax, T. congolense) have been sequenced and are available to search online. The trypanosome strains chosen for the genome sequencing projects were selected because they had been well characterised in the laboratory, but all were isolated several decades ago. The purpose of this short review is to provide some background information on the origins and biological characterisation of these strains as a source of reference for future users of the genome data. With high throughput sequencing of many more trypanosome genomes in prospect, it is important to understand the phylogenetic relationships of the genome strains.
摘要
几种采采蝇传播的非洲锥虫（布氏锥虫、布氏冈比亚锥虫、布氏罗得西亚锥虫、刚果锥虫）的基因组已经测序，并可在线搜索。用于基因组测序项目的锥虫株是经过精心挑选的，因为它们在实验室中得到了很好的鉴定，但都是几十年前分离出来的。本综述的目的是提供这些菌株的起源和生物学特征的一些背景信息，以供未来基因组数据的使用者参考。随着高通量测序技术的发展，有必要了解基因组菌株的系统发育关系。
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3
Genetic engineering of Trypanosoma (Dutonella) vivax and in vitro differentiation under axenic conditions.
PLoS Negl Trop Dis. 2011 Dec;5(12):e1461. doi: 10.1371/journal.pntd.0001461. Epub 2011 Dec 27.
4
Phylogeography and taxonomy of Trypanosoma brucei.
PLoS Negl Trop Dis. 2011 Feb 8;5(2):e961. doi: 10.1371/journal.pntd.0000961.
5
The genome sequence of Trypanosoma brucei gambiense, causative agent of chronic human african trypanosomiasis.
PLoS Negl Trop Dis. 2010 Apr 13;4(4):e658. doi: 10.1371/journal.pntd.0000658.
6
Conserved sequence of the TgsGP gene in Group 1 Trypanosoma brucei gambiense.
Infect Genet Evol. 2010 May;10(4):453-8. doi: 10.1016/j.meegid.2010.03.005. Epub 2010 Mar 17.
7
Complete in vitro life cycle of Trypanosoma congolense: development of genetic tools.
PLoS Negl Trop Dis. 2010 Mar 2;4(3):e618. doi: 10.1371/journal.pntd.0000618.
8
New Trypanosoma (Duttonella) vivax genotypes from tsetse flies in East Africa.
Parasitology. 2010 Apr;137(4):641-50. doi: 10.1017/S0031182009991508. Epub 2009 Dec 7.
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10
Species-specific probes for the identification of the African tsetse-transmitted trypanosomes.
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