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Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction.脱硫肠状菌 DCB-2 的基因组序列,一种能够脱卤和还原金属的革兰氏阳性厌氧菌。
BMC Microbiol. 2012 Feb 8;12:21. doi: 10.1186/1471-2180-12-21.
2
The ether-cleaving methyltransferase of the strict anaerobe Acetobacterium dehalogenans: analysis of the zinc-binding site.严格厌氧菌产甲烷菌属的醚裂解甲基转移酶:锌结合位点分析。
FEMS Microbiol Lett. 2011 May;318(2):131-6. doi: 10.1111/j.1574-6968.2011.02251.x. Epub 2011 Mar 11.
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Ether cleaving methyltransferases of the strict anaerobe Acetobacterium dehalogenans: controlling the substrate spectrum by genetic engineering of the N-terminus.严格厌氧菌脱硫醋酸杆菌中的醚裂解甲基转移酶:通过遗传工程改造 N 端控制底物谱。
Mol Microbiol. 2010 Oct;78(1):230-7. doi: 10.1111/j.1365-2958.2010.07333.x.
4
The integrated microbial genomes system: an expanding comparative analysis resource.整合微生物基因组系统:一个不断扩展的比较分析资源。
Nucleic Acids Res. 2010 Jan;38(Database issue):D382-90. doi: 10.1093/nar/gkp887. Epub 2009 Oct 28.
5
RamA, a protein required for reductive activation of corrinoid-dependent methylamine methyltransferase reactions in methanogenic archaea.RamA,一种产甲烷古菌中钴胺素依赖性甲胺甲基转移酶反应还原激活所必需的蛋白质。
J Biol Chem. 2009 Jan 23;284(4):2285-95. doi: 10.1074/jbc.M807392200. Epub 2008 Nov 28.
6
The ether-cleaving methyltransferase system of the strict anaerobe Acetobacterium dehalogenans: analysis and expression of the encoding genes.严格厌氧菌脱卤产乙酸菌的醚裂解甲基转移酶系统:编码基因的分析与表达
J Bacteriol. 2009 Jan;191(2):588-99. doi: 10.1128/JB.01104-08. Epub 2008 Nov 14.
7
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Environ Microbiol. 2008 Oct;10(10):2550-73. doi: 10.1111/j.1462-2920.2008.01679.x. Epub 2008 Jun 9.
8
Enzymes involved in the anoxic utilization of phenyl methyl ethers by Desulfitobacterium hafniense DCB2 and Desulfitobacterium hafniense PCE-S.哈氏脱硫杆菌DCB2和哈氏脱硫杆菌PCE-S对苯甲醚进行缺氧利用过程中涉及的酶。
Arch Microbiol. 2008 Oct;190(4):489-95. doi: 10.1007/s00203-008-0400-8. Epub 2008 Jul 8.
9
Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex.基于甲醇-钴胺素甲基转移酶复合物晶体结构对生物甲醇活化机制的洞察。
Proc Natl Acad Sci U S A. 2006 Dec 12;103(50):18917-22. doi: 10.1073/pnas.0603650103. Epub 2006 Dec 1.
10
The Desulfitobacterium genus.脱卤脱硫杆菌属。
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脱硫肠状菌 DCB-2 的 O-去甲基酶的特性。

Characterization of an O-demethylase of Desulfitobacterium hafniense DCB-2.

机构信息

Institut für Mikrobiologie, Friedrich Schiller Universität Jena, Lehrstuhl für Angewandte und Ökologische Mikrobiologie, Jena, Germany.

出版信息

J Bacteriol. 2012 Jul;194(13):3317-26. doi: 10.1128/JB.00146-12. Epub 2012 Apr 20.

DOI:10.1128/JB.00146-12
PMID:22522902
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3434752/
Abstract

Besides acetogenic bacteria, only Desulfitobacterium has been described to utilize and cleave phenyl methyl ethers under anoxic conditions; however, no ether-cleaving O-demethylases from the latter organisms have been identified and investigated so far. In this study, genes of an operon encoding O-demethylase components of Desulfitobacterium hafniense strain DCB-2 were cloned and heterologously expressed in Escherichia coli. Methyltransferases I and II were characterized. Methyltransferase I mediated the ether cleavage and the transfer of the methyl group to the superreduced corrinoid of a corrinoid protein. Desulfitobacterium methyltransferase I had 66% identity (80% similarity) to that of the vanillate-demethylating methyltransferase I (OdmB) of Acetobacterium dehalogenans. The substrate spectrum was also similar to that of the latter enzyme; however, Desulfitobacterium methyltransferase I showed a higher level of activity for guaiacol and used methyl chloride as a substrate. Methyltransferase II catalyzed the transfer of the methyl group from the methylated corrinoid protein to tetrahydrofolate. It also showed a high identity (∼70%) to methyltransferases II of A. dehalogenans. The corrinoid protein was produced in E. coli as cofactor-free apoprotein that could be reconstituted with hydroxocobalamin or methylcobalamin to function in the methyltransferase I and II assays. Six COG3894 proteins, which were assumed to function as activating enzymes mediating the reduction of the corrinoid protein after an inadvertent oxidation of the corrinoid cofactor, were studied with respect to their abilities to reduce the recombinant reconstituted corrinoid protein. Of these six proteins, only one was found to catalyze the reduction of the corrinoid protein.

摘要

除了产乙酸菌之外,仅有脱硫杆菌属被描述能够在缺氧条件下利用和裂解苯甲基醚;然而,到目前为止,尚未从后者中鉴定和研究出醚裂解 O-脱甲基酶。在这项研究中,克隆了编码脱硫杆菌 DCB-2 种系 O-脱甲基酶成分的操纵子基因,并在大肠杆菌中异源表达。鉴定并表征了甲基转移酶 I 和 II。甲基转移酶 I 介导醚裂解和将甲基基团转移到钴胺素蛋白的超还原钴胺素上。脱硫杆菌甲基转移酶 I 与产乙酸菌脱卤甲基转移酶 I(OdmB)具有 66%的同一性(80%的相似性)。底物谱也与后者的酶相似;然而,脱硫杆菌甲基转移酶 I 对愈创木酚和甲基氯的活性更高。甲基转移酶 II 催化从甲基化的钴胺素蛋白向四氢叶酸转移甲基基团。它与产乙酸菌脱卤甲基转移酶 II 的相似性也很高(约 70%)。钴胺素蛋白在大肠杆菌中作为没有辅因子的脱辅基蛋白产生,可与羟钴胺素或甲基钴胺素重组,以在甲基转移酶 I 和 II 测定中发挥作用。研究了六个假定为激活酶的 COG3894 蛋白,这些酶介导钴胺素辅因子意外氧化后钴胺素蛋白的还原,以研究其还原重组的重组钴胺素蛋白的能力。在这六个蛋白中,只有一个被发现能够催化钴胺素蛋白的还原。