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早衰型人类WRN核酸外切酶的果蝇同源物DmWRNexo可切割复制底物,但会受到尿嘧啶或无碱基位点的抑制:体外DmWRNexo活性分析

The Drosophila orthologue of progeroid human WRN exonuclease, DmWRNexo, cleaves replication substrates but is inhibited by uracil or abasic sites : analysis of DmWRNexo activity in vitro.

作者信息

Mason Penelope A, Boubriak Ivan, Robbins Timothy, Lasala Ralph, Saunders Robert, Cox Lynne S

机构信息

Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK.

出版信息

Age (Dordr). 2013 Jun;35(3):793-806. doi: 10.1007/s11357-012-9411-0. Epub 2012 May 5.

DOI:10.1007/s11357-012-9411-0
PMID:22562358
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3636389/
Abstract

Werner syndrome (WS) is a rare late-onset premature ageing disease showing many of the phenotypes associated with normal ageing, and provides one of the best models for investigating cellular pathways that lead to normal ageing. WS is caused by mutation of WRN, which encodes a multifunctional DNA replication and repair helicase/exonuclease. To investigate the role of WRN protein's unique exonuclease domain, we have recently identified DmWRNexo, the fly orthologue of the exonuclease domain of human WRN. Here, we fully characterise DmWRNexo exonuclease activity in vitro, confirming 3'-5' polarity, demonstrating a requirement for Mg(2+), inhibition by ATP, and an ability to degrade both single-stranded DNA and duplex DNA substrates with 3' or 5' overhangs, or bubble structures, but with no activity on blunt ended DNA duplexes. We report a novel active site mutation that ablates enzyme activity. Lesional substrates containing uracil are partially cleaved by DmWRNexo, but the enzyme pauses on such substrates and is inhibited by abasic sites. These strong biochemical similarities to human WRN suggest that Drosophila can provide a valuable experimental system for analysing the importance of WRN exonuclease in cell and organismal ageing.

摘要

沃纳综合征(WS)是一种罕见的迟发性早衰疾病,表现出许多与正常衰老相关的表型,为研究导致正常衰老的细胞途径提供了最佳模型之一。WS由WRN基因突变引起,WRN基因编码一种多功能DNA复制和修复解旋酶/核酸外切酶。为了研究WRN蛋白独特的核酸外切酶结构域的作用,我们最近鉴定出了DmWRNexo,它是人类WRN核酸外切酶结构域在果蝇中的同源物。在这里,我们全面表征了DmWRNexo在体外的核酸外切酶活性,证实了其3'-5'极性,证明了对Mg(2+)的需求,ATP对其有抑制作用,并且它能够降解具有3'或5'突出端或泡状结构的单链DNA和双链DNA底物,但对平端DNA双链体无活性。我们报道了一种消除酶活性的新型活性位点突变。含有尿嘧啶的损伤底物被DmWRNexo部分切割,但该酶在此类底物上会停顿,并被无碱基位点抑制。这些与人类WRN的强烈生化相似性表明,果蝇可以为分析WRN核酸外切酶在细胞和机体衰老中的重要性提供一个有价值的实验系统。

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The Drosophila orthologue of progeroid human WRN exonuclease, DmWRNexo, cleaves replication substrates but is inhibited by uracil or abasic sites : analysis of DmWRNexo activity in vitro.早衰型人类WRN核酸外切酶的果蝇同源物DmWRNexo可切割复制底物,但会受到尿嘧啶或无碱基位点的抑制:体外DmWRNexo活性分析
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2
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本文引用的文献

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Identification of a coiled coil in werner syndrome protein that facilitates multimerization and promotes exonuclease processivity.鉴定 Werner 综合征蛋白中的一个卷曲螺旋结构域,该结构域有助于形成多聚体并促进核酸外切酶的进程。
J Biol Chem. 2010 Aug 13;285(33):25699-707. doi: 10.1074/jbc.M110.124941. Epub 2010 Jun 1.
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Processive translocation mechanism of the human Bloom's syndrome helicase along single-stranded DNA.人布鲁姆综合征解旋酶沿单链 DNA 的连续易位机制。
Nucleic Acids Res. 2010 Jul;38(13):4404-14. doi: 10.1093/nar/gkq145. Epub 2010 Mar 8.
3
DmWRNexo is a 3'-5' exonuclease: phenotypic and biochemical characterization of mutants of the Drosophila orthologue of human WRN exonuclease.
Werner 综合征模型中应激反应的特征。
Biomolecules. 2021 Dec 12;11(12):1868. doi: 10.3390/biom11121868.
4
Evidence for premature aging in a Drosophila model of Werner syndrome. Werner 综合征果蝇模型中的早衰证据。
Exp Gerontol. 2019 Nov;127:110733. doi: 10.1016/j.exger.2019.110733. Epub 2019 Sep 10.
5
Lifespan and Stress Resistance in Drosophila with Overexpressed DNA Repair Genes.DNA修复基因过表达的果蝇的寿命和抗逆性
Sci Rep. 2015 Oct 19;5:15299. doi: 10.1038/srep15299.
6
The Drosophila Werner exonuclease participates in an exonuclease-independent response to replication stress.果蝇沃纳核酸外切酶参与对复制应激的非核酸外切酶依赖性反应。
Genetics. 2014 Jun;197(2):643-52. doi: 10.1534/genetics.114.164228. Epub 2014 Apr 7.
7
A fluorescence-based exonuclease assay to characterize DmWRNexo, orthologue of human progeroid WRN exonuclease, and its application to other nucleases.一种基于荧光的核酸外切酶分析方法,用于表征人类早衰相关WRN核酸外切酶的直系同源物DmWRNexo及其在其他核酸酶中的应用。
J Vis Exp. 2013 Dec 23(82):e50722. doi: 10.3791/50722.
DmWRNexo是一种3'-5'核酸外切酶:人类WRN核酸外切酶果蝇直系同源物突变体的表型和生化特征
Biogerontology. 2009 Jun;10(3):267-77. doi: 10.1007/s10522-008-9181-3. Epub 2008 Oct 28.
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The SWISS-MODEL Repository and associated resources.SWISS-MODEL 资源库及相关资源。
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WRN protects against topo I but not topo II inhibitors by preventing DNA break formation.WRN 通过防止 DNA 断裂形成来抵御拓扑异构酶 I 抑制剂,但不能抵御拓扑异构酶 II 抑制剂。
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Nucleic Acids Res. 2008 Sep;36(15):4975-87. doi: 10.1093/nar/gkn468. Epub 2008 Jul 25.
7
Identification and characterization of a Drosophila ortholog of WRN exonuclease that is required to maintain genome integrity.果蝇WRN核酸外切酶直系同源物的鉴定与表征,该酶对于维持基因组完整性是必需的。
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9
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Nucleic Acids Res. 2007;35(17):5729-47. doi: 10.1093/nar/gkm561. Epub 2007 Aug 23.