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本文引用的文献
1
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.
Bioinformatics. 2011 Jun 1;27(11):1571-2. doi: 10.1093/bioinformatics/btr167. Epub 2011 Apr 14.
2
BS Seeker: precise mapping for bisulfite sequencing.
BMC Bioinformatics. 2010 Apr 23;11:203. doi: 10.1186/1471-2105-11-203.
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BRAT: bisulfite-treated reads analysis tool.
Bioinformatics. 2010 Feb 15;26(4):572-3. doi: 10.1093/bioinformatics/btp706. Epub 2009 Dec 22.
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Human DNA methylomes at base resolution show widespread epigenomic differences.
Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14.
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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.
Genome Biol. 2009;10(3):R25. doi: 10.1186/gb-2009-10-3-r25. Epub 2009 Mar 4.
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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.
Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745. Epub 2008 Feb 17.
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A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands.
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