Department of Microbiology and Immunology, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Plasmid. 2012 Sep;68(2):93-104. doi: 10.1016/j.plasmid.2012.04.003. Epub 2012 May 8.
The promiscuous IncPα plasmids RK2 and R995 encode a broad-host-range partition system, whose essential components include the incC and korB genes and a DNA site (O(B)) to which the korB product binds. IncC2, the smaller of the two incC products, is sufficient for stabilization of R995ΔincC. It is a member of the type Ia ParA family of partition ATPases. To better understand the role of ATP in partition, we constructed three alanine-substitution mutants of IncC2. Each mutation changed a different residue of the Walker-like ATP-binding and hydrolysis motif, including a lysine (K10) conserved solely among members of the ParA and MinD families. All three IncC2 mutants were defective in plasmid partition, but they differed from one another in other respects. The IncC2 T16A mutant, predicted to be defective in Mg²⁺ coordination, was severely impaired in all activities tested. IncC2 K10A, predicted to be defective in ATP hydrolysis, mediated enhanced incompatibility with R995 derivatives. IncC2 K15A, predicted to be defective in ATP binding, exhibited two distinct incompatibility properties depending on the genotype of the target plasmid. When in trans to plasmids carrying a complementable incC deletion, IncC2 K15A caused dramatic plasmid loss, even at low levels of expression. In trans to wild-type R995 or to R995ΔincC carrying a functional P1 partition system, IncC2 K15A-mediated incompatibility was significantly less than that caused by wild-type IncC2. All three Walker-like A box mutants were also defective for the host toxicity that normally results from co-overexpression of incC and korB. The phenotypes of the mutants support a model in which nucleotide hydrolysis is required for separation of paired plasmid complexes and possible interaction with a host factor.
RK2 和 R995 这两种杂乱的 IncPα 质粒编码了一个广泛宿主范围的分区系统,其基本组件包括 incC 和 korB 基因,以及 korB 产物结合的 DNA 位点(O(B))。两个 incC 产物中的较小者 IncC2 足以稳定 R995ΔincC。它是 ParA 家族ⅠA型分区 ATP 酶的成员。为了更好地理解 ATP 在分区中的作用,我们构建了三个 IncC2 的丙氨酸取代突变体。每个突变改变了 Walker 样 ATP 结合和水解模体的不同残基,包括在 ParA 和 MinD 家族成员中仅保守的赖氨酸(K10)。所有三个 IncC2 突变体在质粒分区中均有缺陷,但在其他方面彼此不同。IncC2 T16A 突变体,预测在 Mg²⁺协调中存在缺陷,在所有测试的活性中均受到严重损害。IncC2 K10A,预测在 ATP 水解中存在缺陷,介导了与 R995 衍生物的增强不相容性。IncC2 K15A,预测在 ATP 结合中存在缺陷,根据靶质粒的基因型表现出两种不同的不相容性特性。当在顺式到携带互补 incC 缺失的质粒上时,IncC2 K15A 导致质粒严重丢失,即使在低表达水平下也是如此。在顺式到野生型 R995 或携带功能 P1 分区系统的 R995ΔincC 上,IncC2 K15A 介导的不相容性明显小于野生型 IncC2 引起的不相容性。所有三个 Walker 样 A 框突变体也对通常由 incC 和 korB 共过表达引起的宿主毒性有缺陷。突变体的表型支持这样一种模型,即核苷酸水解对于分离成对的质粒复合物和与宿主因子的可能相互作用是必需的。