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可可盲蝽象(Sahlbergella singularis)十二个多态性微卫星位点的分离与鉴定

Isolation and characterization of twelve polymorphic microsatellite Loci for the cocoa mirid bug Sahlbergella singularis.

作者信息

Babin Régis, Fenouillet Catherine, Legavre Thierry, Blondin Laurence, Calatayud Caroline, Risterucci Ange-Marie, Chapuis Marie-Pierre

机构信息

Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Unité Propre de Recherche Bioagresseurs Analyse et Maîtrise du Risque, F-34398 Montpellier, France.

Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Unité Mixte de Recherche Amélioration Génétique et Adaptation des Plantes Méditerranéennes et Tropicales, F-34398 Montpellier, France.

出版信息

Int J Mol Sci. 2012;13(4):4412-4417. doi: 10.3390/ijms13044412. Epub 2012 Apr 10.

Abstract

Mirids are the primary pests affecting cocoa production in Africa, but no genetic studies have been conducted on these insects. Here we report the isolation and characterization of 12 polymorphic microsatellite loci for Sahlbergella singularis. A microsatellite-enriched genomic DNA library was developed and screened to identify marker loci. Twelve polymorphic loci were identified by screening 28 individuals collected from one presumed population in cocoa plantations in Southern Cameroon. The number of alleles ranged from 5 to 25, whereas the observed and the expected heterozygosities ranged from 0.179 to 0.786 and from 0.671 to 0.946, respectively. Tests showed significant deviations from HW equilibrium for four loci, but no linkage disequilibrium was detected at any of the loci. No cross-species amplification was observed in two other mirid pests in Africa.

摘要

盲蝽是影响非洲可可生产的主要害虫,但尚未对这些昆虫进行基因研究。在此,我们报告了奇异瘤盲蝽12个多态性微卫星位点的分离和特征。构建并筛选了一个富含微卫星的基因组DNA文库以鉴定标记位点。通过对从喀麦隆南部可可种植园一个假定种群中采集的28个个体进行筛选,鉴定出12个多态性位点。等位基因数量从5到25不等,而观察到的杂合度和预期杂合度分别从0.179到0.786和从0.671到0.946。测试表明,四个位点显著偏离哈迪-温伯格平衡,但在任何位点均未检测到连锁不平衡。在非洲的另外两种盲蝽害虫中未观察到跨物种扩增。

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