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Saunders鸥(鸟纲,鸥科)四核苷酸重复多态性微卫星位点的分离与特征分析

Isolation and characterization of tetranucleotide repeat polymorphic microsatellite loci in Larus saundersi (Aves, Laridae).

作者信息

Jiang H-X, Ren S L, Hou Y-Q, Yang M, Wu X-B

机构信息

Key Laboratory of Forestry Protection of State Forestry Administration, Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China.

出版信息

Genet Mol Res. 2011 Sep 12;10(3):2034-7. doi: 10.4238/vol10-3gmr1164.

Abstract

Nine polymorphic microsatellite loci were isolated, using tetranucleotide repeat oligonucleotide probes from an enriched DNA library of the globally "vulnerable" Saunders's gull (Larus saundersi), collected from the Yancheng coastal wetland, one of the three remaining breeding sites in China. Six breast muscle tissues and 16 blood samples from 22 gulls and eight eggshell membrane tissues were collected for this analysis. The number of alleles per locus ranged from 4 to 15, with a mean of 8.9. The observed and expected heterozygosities ranged from 0.58 to 0.89 and 0.58 to 0.9, with means of 0.77 and 0.81, respectively. No significant linkage disequilibrium and no divergence from Hardy-Weinberg equilibrium were detected among these loci. Based on Micro-Checker tests, no null alleles are present at any of the loci. The microsatellite loci described here will be valuable for exploring population genetic structure and for other relevant genetic studies of Saunders's gull.

摘要

利用四核苷酸重复寡核苷酸探针,从全球“易危”的黑嘴鸥( Saunders's gull,学名:Larus saundersi )的富集DNA文库中分离出9个多态性微卫星位点,该文库取自中国仅存的三个繁殖地之一的盐城沿海湿地。为进行此分析,采集了22只黑嘴鸥的6份胸肌组织、16份血液样本以及8份蛋壳膜组织。每个位点的等位基因数量在4至15个之间,平均为8.9个。观察到的杂合度和预期杂合度分别在0.58至0.89以及0.58至0.9之间,平均值分别为0.77和0.81。在这些位点之间未检测到显著的连锁不平衡,也未发现偏离哈迪 - 温伯格平衡的情况。基于Micro - Checker测试,任何位点均不存在无效等位基因。本文描述的微卫星位点对于探索黑嘴鸥的种群遗传结构以及其他相关遗传研究将具有重要价值。

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