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[Identification and function analysis of pseudogenes].[假基因的鉴定与功能分析]
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Pseudogenes: pseudo-functional or key regulators in health and disease?假基因:在健康和疾病中是伪功能的还是关键调控因子?
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Molecular fossils "pseudogenes" as functional signature in biological system.分子化石“假基因”作为生物系统中的功能特征。
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Pseudogenes: Four Decades of Discovery.假基因:四十年的发现历程。
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Pseudogenes transcribed in breast invasive carcinoma show subtype-specific expression and ceRNA potential.在乳腺浸润性癌中转录的假基因表现出亚型特异性表达和竞争性内源RNA潜力。
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Behind the Scene: Surprises and Snags of Pseudogenes.幕后:假基因的惊喜与困扰。
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Not so pseudo anymore: pseudogenes as therapeutic targets.不再是假的了:假基因作为治疗靶点。
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Pseudogenes: pseudo or real functional elements?假基因:伪功能还是真功能元件?
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本文引用的文献

1
A transcribed pseudogene of MYLK promotes cell proliferation.一个 MYLK 的转录假基因促进了细胞增殖。
FASEB J. 2011 Jul;25(7):2305-12. doi: 10.1096/fj.10-177808. Epub 2011 Mar 25.
2
Pseudogenes: pseudo-functional or key regulators in health and disease?假基因:在健康和疾病中是伪功能的还是关键调控因子?
RNA. 2011 May;17(5):792-8. doi: 10.1261/rna.2658311. Epub 2011 Mar 11.
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Pseudogene: lessons from PCR bias, identification and resurrection.假基因:来自 PCR 偏倚、鉴定和复活的教训。
Mol Biol Rep. 2011 Aug;38(6):3709-15. doi: 10.1007/s11033-010-0485-4. Epub 2010 Nov 30.
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Annotating non-coding regions of the genome.注释基因组的非编码区域。
Nat Rev Genet. 2010 Aug;11(8):559-71. doi: 10.1038/nrg2814. Epub 2010 Jul 13.
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Segmental duplications in the human genome reveal details of pseudogene formation.人类基因组中的片段重复揭示了假基因形成的细节。
Nucleic Acids Res. 2010 Nov;38(20):6997-7007. doi: 10.1093/nar/gkq587. Epub 2010 Jul 8.
6
A new approach for the identification of processed pseudogenes.一种鉴定加工假基因的新方法。
J Comput Biol. 2010 May;17(5):755-65. doi: 10.1089/cmb.2009.0027.
7
Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates.鉴定和分析单一假基因:人类和其他灵长类动物的历史性和当代性基因丢失。
Genome Biol. 2010;11(3):R26. doi: 10.1186/gb-2010-11-3-r26. Epub 2010 Mar 8.
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CellMiner: a relational database and query tool for the NCI-60 cancer cell lines.CellMiner:一种用于NCI-60癌细胞系的关系数据库和查询工具。
BMC Genomics. 2009 Jun 23;10:277. doi: 10.1186/1471-2164-10-277.
9
The life and death of gene families.基因家族的生死
Bioessays. 2009 Jan;31(1):29-39. doi: 10.1002/bies.080085.
10
Genomics: protein fossils live on as RNA.基因组学:蛋白质化石以RNA的形式留存。
Nature. 2008 Jun 5;453(7196):729-31. doi: 10.1038/453729a.

假基因

Pseudogenes.

作者信息

Tutar Yusuf

机构信息

Department of Biochemistry, Faculty of Medicine, Cumhuriyet University, 58140 Sivas, Turkey.

出版信息

Comp Funct Genomics. 2012;2012:424526. doi: 10.1155/2012/424526. Epub 2012 May 7.

DOI:10.1155/2012/424526
PMID:22611337
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3352212/
Abstract

Pseudogenes are ubiquitous and abundant in genomes. Pseudogenes were once called "genomic fossils" and treated as "junk DNA" several years. Nevertheless, it has been recognized that some pseudogenes play essential roles in gene regulation of their parent genes, and many pseudogenes are transcribed into RNA. Pseudogene transcripts may also form small interfering RNA or decrease cellular miRNA concentration. Thus, pseudogenes regulate tumor suppressors and oncogenes. Their essential functions draw the attention of our research group in my current work on heat shock protein 90: a chaperone of oncogenes. The paper reviews our current knowledge on pseudogenes and evaluates preliminary results of the chaperone data. Current efforts to understand pseudogenes interactions help to understand the functions of a genome.

摘要

假基因在基因组中普遍存在且数量众多。假基因曾被称为“基因组化石”,并在过去几年被视为“垃圾DNA”。然而,人们已经认识到一些假基因在其亲本基因的基因调控中发挥着重要作用,并且许多假基因会转录成RNA。假基因转录本也可能形成小干扰RNA或降低细胞内miRNA浓度。因此,假基因可调控肿瘤抑制基因和癌基因。它们的重要功能引起了我们研究小组在我目前关于热休克蛋白90(一种癌基因伴侣)的研究工作中的关注。本文综述了我们目前对假基因的认识,并评估了伴侣数据的初步结果。目前了解假基因相互作用的努力有助于理解基因组的功能。