• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

涉及阴离子模板在过渡态的大环化反应的动力学分析。

Kinetic analysis for macrocyclizations involving anionic template at the transition state.

作者信息

Martí-Centelles Vicente, Burguete M Isabel, Luis Santiago V

机构信息

Departamento de Química Inorgánica y Orgánica, Universitat Jaume I, E12071 Castellón de la Plana, Spain.

出版信息

ScientificWorldJournal. 2012;2012:748251. doi: 10.1100/2012/748251. Epub 2012 Apr 22.

DOI:10.1100/2012/748251
PMID:22666148
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3347868/
Abstract

Several kinetic models for the macrocyclization of a C₂ pseudopeptide with a dihalide through a S(N)2 reaction have been developed. These models not only focus on the kinetic analysis of the main macrocyclization reaction, but also consider the competitive oligomerization/polymerization processes yielding undesired oligomeric/polymeric byproducts. The effect of anions has also been included in the kinetic models, as they can act as catalytic templates in the transition state reducing and stabilizing the transition state. The corresponding differential equation systems for each kinetic model can be solved numerically. Through a comprehensive analysis of these results, it is possible to obtain a better understanding of the different parameters that are involved in the macrocyclization reaction mechanism and to develop strategies for the optimization of the desired processes.

摘要

已经开发了几种用于C₂拟肽与二卤化物通过S(N)2反应进行大环化的动力学模型。这些模型不仅关注主要大环化反应的动力学分析,还考虑了产生不需要的低聚物/聚合物副产物的竞争性低聚/聚合过程。动力学模型中还包括了阴离子的影响,因为它们可以在过渡态中充当催化模板,降低并稳定过渡态。每个动力学模型的相应微分方程组都可以通过数值方法求解。通过对这些结果的全面分析,可以更好地理解大环化反应机制中涉及的不同参数,并制定优化所需过程的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a88491a1e288/TSWJ2012-748251.015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/5c7f25fca4f0/TSWJ2012-748251.sch.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a648ea1a2ab9/TSWJ2012-748251.sch.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/13e1fb27cbae/TSWJ2012-748251.sch.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/5e8cc518cd4c/TSWJ2012-748251.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/50681804f3fc/TSWJ2012-748251.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f7ad74373e2a/TSWJ2012-748251.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/75e710592345/TSWJ2012-748251.sch.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/084854b01262/TSWJ2012-748251.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/6651eaf0461e/TSWJ2012-748251.sch.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/597fd8e6ee14/TSWJ2012-748251.sch.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/793cf6edb3c5/TSWJ2012-748251.sch.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a2169202ec59/TSWJ2012-748251.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/ae00dcb63a45/TSWJ2012-748251.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/29e82062681c/TSWJ2012-748251.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f654475a4cc1/TSWJ2012-748251.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/2ea5961afc28/TSWJ2012-748251.009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f16849ac3809/TSWJ2012-748251.010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/71a1dd2703ea/TSWJ2012-748251.011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/99b38fbcfc1e/TSWJ2012-748251.012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/bfb4f0fdf54c/TSWJ2012-748251.013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/1ef0e8150845/TSWJ2012-748251.014.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a88491a1e288/TSWJ2012-748251.015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/5c7f25fca4f0/TSWJ2012-748251.sch.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a648ea1a2ab9/TSWJ2012-748251.sch.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/13e1fb27cbae/TSWJ2012-748251.sch.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/5e8cc518cd4c/TSWJ2012-748251.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/50681804f3fc/TSWJ2012-748251.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f7ad74373e2a/TSWJ2012-748251.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/75e710592345/TSWJ2012-748251.sch.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/084854b01262/TSWJ2012-748251.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/6651eaf0461e/TSWJ2012-748251.sch.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/597fd8e6ee14/TSWJ2012-748251.sch.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/793cf6edb3c5/TSWJ2012-748251.sch.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a2169202ec59/TSWJ2012-748251.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/ae00dcb63a45/TSWJ2012-748251.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/29e82062681c/TSWJ2012-748251.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f654475a4cc1/TSWJ2012-748251.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/2ea5961afc28/TSWJ2012-748251.009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/f16849ac3809/TSWJ2012-748251.010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/71a1dd2703ea/TSWJ2012-748251.011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/99b38fbcfc1e/TSWJ2012-748251.012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/bfb4f0fdf54c/TSWJ2012-748251.013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/1ef0e8150845/TSWJ2012-748251.014.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c15e/3347868/a88491a1e288/TSWJ2012-748251.015.jpg

相似文献

1
Kinetic analysis for macrocyclizations involving anionic template at the transition state.涉及阴离子模板在过渡态的大环化反应的动力学分析。
ScientificWorldJournal. 2012;2012:748251. doi: 10.1100/2012/748251. Epub 2012 Apr 22.
2
Peptide macrocyclization by transition metal catalysis.过渡金属催化的肽大环化。
Chem Soc Rev. 2020 Apr 7;49(7):2039-2059. doi: 10.1039/c9cs00366e.
3
The dinuclear Zn(II) complex catalyzed cyclization of a series of 2-hydroxypropyl aryl phosphate RNA models: progressive change in mechanism from rate-limiting P-O bond cleavage to substrate binding.双核锌(II)配合物催化一系列2-羟丙基芳基磷酸酯RNA模型的环化反应:反应机制从限速的P-O键断裂逐步转变为底物结合。
J Am Chem Soc. 2007 Dec 26;129(51):16238-48. doi: 10.1021/ja076847d. Epub 2007 Nov 30.
4
Templating irreversible covalent macrocyclization by using anions.通过使用阴离子进行不可逆的共价大环化反应的模板化。
Chemistry. 2013 Mar 11;19(11):3710-4. doi: 10.1002/chem.201204306. Epub 2013 Jan 31.
5
Highly Selective Anion Template Effect in the Synthesis of Constrained Pseudopeptidic Macrocyclic Cyclophanes.高选择性阴离子模板效应对约束性拟肽大环环芳的合成。
J Org Chem. 2020 Jan 17;85(2):1138-1145. doi: 10.1021/acs.joc.9b03048. Epub 2020 Jan 3.
6
Stereoconfining macrocyclizations in the total synthesis of natural products.立体限制大环化反应在天然产物全合成中的应用。
Nat Prod Rep. 2019 Nov 13;36(11):1546-1575. doi: 10.1039/c8np00094h.
7
One-pot multimolecular macrocyclization for the expedient synthesis of macrocyclic aromatic pentamers by a chain growth mechanism.一锅法多分子大环化反应,通过链增长机制,快速合成大环芳香五聚体。
Chem Asian J. 2011 Dec 2;6(12):3298-305. doi: 10.1002/asia.201100409. Epub 2011 Jul 20.
8
Design of biomimetic catalysts by molecular imprinting in synthetic polymers: the role of transition state stabilization.仿生催化剂的分子印迹设计在合成聚合物中的应用:过渡态稳定的作用。
Acc Chem Res. 2012 Feb 21;45(2):239-47. doi: 10.1021/ar200146m. Epub 2011 Oct 3.
9
Anchoring of phospholipase A2: the effect of anions and deuterated water, and the role of N-terminus region.磷脂酶A2的锚定:阴离子和重水的影响以及N端区域的作用
Biochim Biophys Acta. 1986 Sep 11;860(3):448-61. doi: 10.1016/0005-2736(86)90542-0.
10
Catalytic efficiency, kinetic co-operativity of oligomeric enzymes and evolution.寡聚酶的催化效率、动力学协同性与进化
J Theor Biol. 1986 Dec 21;123(4):431-51. doi: 10.1016/s0022-5193(86)80212-0.

本文引用的文献

1
Template effects in S(N)2 displacements for the preparation of pseudopeptidic macrocycles.模板效应对 S(N)2 取代反应制备拟肽大环的影响。
Chemistry. 2012 Feb 20;18(8):2409-22. doi: 10.1002/chem.201101416. Epub 2012 Jan 19.
2
First determination of the rate constant for ring-closure of an azahexenoyl radical: 6-aza-7-ethyl-5-hexenoyl.首次测定氮杂己二烯酰基自由基的闭环反应速率常数:6-氮杂-7-乙基-5-己烯酰。
Chem Commun (Camb). 2010 Sep 21;46(35):6521-3. doi: 10.1039/c0cc01262a. Epub 2010 Aug 10.
3
Density functional theory and RRKM calculations of decompositions of the metastable E-2,4-pentadienal molecular ions.
密度泛函理论和 RRKM 计算研究了 E-2,4-戊二烯醛分子离子的亚稳态分解。
J Mass Spectrom. 2010 Jul;45(7):722-33. doi: 10.1002/jms.1760.
4
Hydrogen bonded aryl amide and hydrazide oligomers: a new generation of preorganized soft frameworks.氢键芳基酰胺和酰肼低聚物:新一代预组织软骨架。
Chem Commun (Camb). 2010 Mar 14;46(10):1601-16. doi: 10.1039/b924552a. Epub 2010 Jan 29.
5
Synthetic approaches for the preparation of cyclic polymers.制备环状聚合物的合成方法。
Chem Soc Rev. 2009 Aug;38(8):2202-13. doi: 10.1039/b809916m. Epub 2009 Apr 17.
6
One-pot formation of large macrocycles with modifiable peripheries and internal cavities.一锅法合成具有可修饰外围和内部空腔的大型大环化合物。
Angew Chem Int Ed Engl. 2009;48(17):3150-4. doi: 10.1002/anie.200900584.
7
Efficient kinetic macrocyclization.高效动力学大环化
J Am Chem Soc. 2009 Feb 25;131(7):2629-37. doi: 10.1021/ja807935y.
8
Supramolecular control for the modular synthesis of pseudopeptidic macrocycles through an anion-templated reaction.通过阴离子模板反应对拟肽大环化合物进行模块化合成的超分子控制。
J Am Chem Soc. 2008 May 14;130(19):6137-44. doi: 10.1021/ja710132c. Epub 2008 Apr 11.
9
Folding control in cyclic peptides through N-methylation pattern selection: formation of antiparallel beta-sheet dimers, double reverse turns and supramolecular helices by 3alpha,gamma cyclic peptides.通过N-甲基化模式选择实现环肽中的折叠控制:3α,γ环肽形成反平行β-折叠二聚体、双反向转角和超分子螺旋
Chemistry. 2008;14(7):2100-11. doi: 10.1002/chem.200701059.
10
Cyclic peptoids.环状类肽
J Am Chem Soc. 2007 Mar 21;129(11):3218-25. doi: 10.1021/ja066960o. Epub 2007 Feb 27.