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鉴定从泰国血液和粪便标本中分离得到的肠炎沙门氏菌血清型肠炎亚种。

Characterization of Salmonella enterica serovar Enteritidis isolates recovered from blood and stool specimens in Thailand.

机构信息

Division of Bacterial Genomics and Epidemiology, WHO Collaborating Center for Antimicrobial Resistance in Food borne Pathogens and European Union Reference Laboratory for Antimicrobial Resistance, National Food Institute, Technical University of Denmark, Kemitorvet, DK-2800, Kgs. Lyngby, Denmark.

出版信息

BMC Microbiol. 2012 Jun 6;12:92. doi: 10.1186/1471-2180-12-92.

Abstract

BACKGROUND

Bacteremia due to Salmonella spp. is a life-threatening condition and is commonly associated with immune compromise. A 2009 observational study estimated risk factors for the ten most common non-typhoidal Salmonella (NTS) serovars isolated from Thai patients between 2002-2007. In this study, 60.8% of Salmonella enterica serovar Enteritidis isolates (n = 1517) were recovered from blood specimens and infection with Salmonella serovar Enteritidis was a statistically significant risk factor for bacteremia when compared to other NTS serovars. Based on this information, we characterized a subset of isolates collected in 2008 to determine if specific clones were recovered from blood or stool specimens at a higher rate. Twenty blood isolates and 20 stool isolates were selected for antimicrobial resistance testing (MIC), phage typing, PFGE, and MLVA.

RESULT

Eight antibiogrammes, seven MLVA types, 14 XbaI/BlnI PFGE pattern combinations, and 11 phage types were observed indicating considerable diversity among the 40 isolates characterized. Composite analysis based on PFGE and MLVA data revealed 22 genotypes. Seven of the genotypes containing two or more isolates were from both stool and blood specimens originating from various months and zones. Additionally, those genotypes were all further discriminated by phage type and/or antibiogramme. Ninety percent of the isolates were ciprofloxacin resistant.

CONCLUSIONS

The increased percentage of bloodstream infections as described in the 2009 observational study could not be attributed to a single clone. Future efforts should focus on assessing the immune status of bacteriaemic patients and identifying prevention and control measures, including attribution studies characterizing non-clinical (animal, food, and environmental) isolates.

摘要

背景

沙门氏菌引起的菌血症是一种危及生命的病症,通常与免疫功能受损有关。2009 年的一项观察性研究估计了 2002-2007 年间从泰国患者中分离出的十种最常见的非伤寒型沙门氏菌(NTS)血清型的危险因素。在这项研究中,60.8%的肠炎沙门氏菌血清型肠亚种(n=1517)分离株来自血液标本,与其他 NTS 血清型相比,感染肠炎沙门氏菌血清型肠亚种是菌血症的一个统计学上显著的危险因素。基于这一信息,我们对 2008 年收集的一组分离株进行了特征描述,以确定是否从血液或粪便标本中回收了特定的克隆。选择了 20 个血液分离株和 20 个粪便分离株进行抗菌药物敏感性测试(MIC)、噬菌体分型、PFGE 和 MLVA。

结果

观察到 8 种抗生素谱、7 种 MLVA 类型、14 种 XbaI/BlnI PFGE 模式组合和 11 种噬菌体类型,表明 40 个分离株的多样性相当大。基于 PFGE 和 MLVA 数据的综合分析显示有 22 种基因型。含有两个或更多分离株的 7 种基因型来自不同月份和不同区域的粪便和血液标本。此外,这些基因型还通过噬菌体类型和/或抗生素谱进一步区分。90%的分离株对环丙沙星耐药。

结论

2009 年观察性研究中描述的血流感染率增加不能归因于单一克隆。未来的工作应侧重于评估菌血症患者的免疫状态,并确定预防和控制措施,包括对非临床(动物、食品和环境)分离株进行特征描述的归因研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b965/3583215/cd039abe35a9/1471-2180-12-92-1.jpg

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