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RGK蛋白Rem2的GDP结合型G结构域的结构

Structure of the GDP-bound G domain of the RGK protein Rem2.

作者信息

Reymond Philippe, Coquard Aline, Chenon Mélanie, Zeghouf Mahel, El Marjou Ahmed, Thompson Andrew, Ménétrey Julie

机构信息

Laboratoire d'Enzymologie et Biochimie Structurales, Centre de Recherche de Gif, CNRS, 91198 Gif-sur-Yvette, France.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jun 1;68(Pt 6):626-31. doi: 10.1107/S1744309112013541. Epub 2012 May 22.

DOI:10.1107/S1744309112013541
PMID:22684057
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3370897/
Abstract

RGK proteins are atypical small GTP-binding proteins that are involved in the regulation of voltage-dependent calcium channels and actin cytoskeleton remodelling. The structure of the Rem2 G domain bound to GDP is reported here in a monoclinic crystal form at 2.66 Å resolution. It is very similar to the structure determined previously from an orthorhombic crystal form. However, differences in the crystal-packing environment revealed that the switch I and switch II regions are flexible and not ordered as previously reported. Comparison of the available RGK protein structures along with those of other small GTP-binding proteins highlights two structural features characteristic of this atypical family and suggests that the conserved tryptophan residue in the DXWEX motif may be a structural determinant of the nucleotide-binding affinity.

摘要

RGK蛋白是一类非典型的小GTP结合蛋白,参与电压依赖性钙通道的调节和肌动蛋白细胞骨架重塑。本文报道了与GDP结合的Rem2 G结构域以单斜晶形式在2.66 Å分辨率下的结构。它与先前从正交晶形式确定的结构非常相似。然而,晶体堆积环境的差异表明,开关I和开关II区域是灵活的,不像先前报道的那样有序。将现有的RGK蛋白结构与其他小GTP结合蛋白的结构进行比较,突出了这个非典型家族的两个结构特征,并表明DXWEX基序中保守的色氨酸残基可能是核苷酸结合亲和力的结构决定因素。

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本文引用的文献

1
RGK family G-domain:GTP analog complex structures and nucleotide-binding properties.RGK 家族 G 结构域:GTP 类似物复合物结构和核苷酸结合特性。
J Mol Biol. 2011 Oct 21;413(2):372-89. doi: 10.1016/j.jmb.2011.08.017. Epub 2011 Aug 29.
2
REFMAC5 for the refinement of macromolecular crystal structures.用于大分子晶体结构精修的REFMAC5
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18.
3
Regulation of calcium channels by RGK proteins.RGK 蛋白对钙通道的调节。
Channels (Austin). 2010 Nov-Dec;4(6):434-9. doi: 10.4161/chan.4.6.12865. Epub 2010 Nov 1.
4
XDS.XDS.(这个词如果没有更多背景信息,很难准确翻译出更有意义的内容,直接保留原文是一种处理方式,或者音译为“克斯达斯”之类,但感觉都不太符合常规翻译场景,你可以补充更多关于这个词的信息以便我更准确翻译 )
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32. doi: 10.1107/S0907444909047337. Epub 2010 Jan 22.
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Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
6
The RGK family of GTP-binding proteins: regulators of voltage-dependent calcium channels and cytoskeleton remodeling.GTP结合蛋白的RGK家族:电压依赖性钙通道和细胞骨架重塑的调节因子。
Cell Signal. 2008 Feb;20(2):292-300. doi: 10.1016/j.cellsig.2007.10.028. Epub 2007 Nov 6.
7
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Gem associates with Ezrin and acts via the Rho-GAP protein Gmip to down-regulate the Rho pathway.Gem与埃兹蛋白结合,并通过Rho-GAP蛋白Gmip发挥作用,下调Rho信号通路。
Mol Biol Cell. 2007 Apr;18(4):1242-52. doi: 10.1091/mbc.e06-06-0510. Epub 2007 Jan 31.
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