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从特定网络集合推断网络特征之间的一般关系。

Inferring general relations between network characteristics from specific network ensembles.

机构信息

Bernstein Center Freiburg, University of Freiburg, Freiburg im Breisgau, Germany.

出版信息

PLoS One. 2012;7(6):e37911. doi: 10.1371/journal.pone.0037911. Epub 2012 Jun 6.

Abstract

Different network models have been suggested for the topology underlying complex interactions in natural systems. These models are aimed at replicating specific statistical features encountered in real-world networks. However, it is rarely considered to which degree the results obtained for one particular network class can be extrapolated to real-world networks. We address this issue by comparing different classical and more recently developed network models with respect to their ability to generate networks with large structural variability. In particular, we consider the statistical constraints which the respective construction scheme imposes on the generated networks. After having identified the most variable networks, we address the issue of which constraints are common to all network classes and are thus suitable candidates for being generic statistical laws of complex networks. In fact, we find that generic, not model-related dependencies between different network characteristics do exist. This makes it possible to infer global features from local ones using regression models trained on networks with high generalization power. Our results confirm and extend previous findings regarding the synchronization properties of neural networks. Our method seems especially relevant for large networks, which are difficult to map completely, like the neural networks in the brain. The structure of such large networks cannot be fully sampled with the present technology. Our approach provides a method to estimate global properties of under-sampled networks in good approximation. Finally, we demonstrate on three different data sets (C. elegans neuronal network, R. prowazekii metabolic network, and a network of synonyms extracted from Roget's Thesaurus) that real-world networks have statistical relations compatible with those obtained using regression models.

摘要

不同的网络模型已经被提出用于模拟自然系统中复杂相互作用的拓扑结构。这些模型旨在复制在真实网络中遇到的特定统计特征。然而,很少有人考虑到为一个特定的网络类获得的结果在多大程度上可以外推到真实世界的网络。我们通过比较不同的经典和最近开发的网络模型,来解决这个问题,这些模型涉及到它们生成具有大结构可变性的网络的能力。特别是,我们考虑了各自的构建方案对生成网络施加的统计约束。在确定了最具变异性的网络之后,我们解决了一个问题,即哪些约束是所有网络类共有的,因此是复杂网络通用统计规律的合适候选者。事实上,我们发现不同网络特性之间存在通用的、与模型无关的依赖性。这使得使用在具有高泛化能力的网络上训练的回归模型,从局部特征推断全局特征成为可能。我们的结果证实并扩展了以前关于神经网络同步特性的发现。我们的方法对于大型网络尤其相关,这些网络难以完全映射,比如大脑中的神经网络。这些大型网络的结构不能完全用现有技术进行采样。我们的方法提供了一种方法,可以在很好的近似下估计欠采样网络的全局特性。最后,我们在三个不同的数据集(秀丽隐杆线虫神经元网络、普氏立克次体代谢网络和从 Roget's Thesaurus 中提取的同义词网络)上演示了真实世界网络具有与使用回归模型获得的统计关系相兼容的特性。

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