Department of Biotechnology (BK21 Program), Chung-Ang University, Anseong 456-756, Republic of Korea.
Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):1062-1067. doi: 10.1099/ijs.0.040519-0. Epub 2012 Jun 15.
A bacterium, designated strain CJ16(T), was isolated from the estuarine wetland of the Han River. Cells of the isolate were yellow-pigmented, Gram-stain-negative, non-motile and rod-shaped. Growth of strain CJ16(T) was observed in TSB at 5-37 °C (optimum 30 °C), at pH 5.0-9.0 (optimum pH 6.0) and with 0-3 % (w/v) NaCl (optimum 0 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CJ16(T) was most closely related to Chryseobacterium hagamense KCTC 22545(T) (97.2 % 16S rRNA gene sequence similarity). Genomic relatedness based on DNA-DNA hybridization between strain CJ16(T) and C. hagamense KCTC 22545(T) was 23 % (strain CJ16(T) as probe) and 19 % (strain KCTC 22545(T) as probe). Chemotaxonomic analysis revealed that strain CJ16(T) possessed MK-6 as the major isoprenoid quinone and sym-homospermidine as the predominant polyamine. The predominant fatty acids were iso-C15 : 0 (26.9 %), iso-C17 : 0 3-OH (16.8 %) and summed feature 9 (comprising C16 : 0 10-methyl and/or iso-C17 : 1ω9c; 10.5 %). The DNA G+C content of strain CJ16(T) was 37.9 mol%. Based on phenotypic, genotypic and phylogenetic studies, strain CJ16(T) represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium rigui sp. nov. is proposed. The type strain is CJ16(T) ( = KACC 16560(T) = JCM 18078(T)).
一株细菌,命名为 CJ16(T) 菌株,从汉江河口湿地中分离得到。该分离株的细胞呈黄色,革兰氏阴性,不运动,呈杆状。CJ16(T) 菌株在 TSB 中生长,温度为 5-37°C(最适温度 30°C),pH 值为 5.0-9.0(最适 pH 值 6.0),NaCl 浓度为 0-3%(w/v)(最适浓度 0%)。基于 16S rRNA 基因序列的系统发育分析表明,CJ16(T) 菌株与 Chryseobacterium hagamense KCTC 22545(T)(97.2% 16S rRNA 基因序列相似性)最为密切相关。基于 CJ16(T) 菌株与 C. hagamense KCTC 22545(T) 之间的 DNA-DNA 杂交的基因组相关性,以 CJ16(T) 菌株作为探针为 23%,以 KCTC 22545(T) 菌株作为探针为 19%。化学分类分析表明,CJ16(T) 菌株含有 MK-6 作为主要的异戊烯醌和 sym-homospermidine 作为主要的多胺。主要脂肪酸为 iso-C15:0(26.9%)、iso-C17:0 3-OH(16.8%)和 sum feature 9(包含 C16:0 10-甲基和/或 iso-C17:1ω9c;10.5%)。CJ16(T) 菌株的 DNA G+C 含量为 37.9mol%。基于表型、基因型和系统发育研究,CJ16(T) 菌株代表 Chryseobacterium 属的一个新种,命名为 Chryseobacterium rigui sp. nov.。模式菌株为 CJ16(T)(=KACC 16560(T)=JCM 18078(T))。