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光金黄杆菌(Chryseobacterium kwangjuense),从辣椒(Capsicum annuum L.)根中分离得到。

Chryseobacterium kwangjuense sp. nov., isolated from pepper (Capsicum annuum L.) root.

机构信息

Laboratory of Plant Disease and Biocontrol, College of Life Sciences and Biotechnology, Korea University, Seoul 136-713, Republic of Korea.

Division of Crop Protection, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2835-2840. doi: 10.1099/ijs.0.048496-0. Epub 2013 Jan 11.

Abstract

The yellow-pigmented, Gram-stain-negative, rod-shaped bacterium KJ1R5(T) was isolated from the root of a pepper plant grown in a field in Kwangju, Korea. Strain KJ1R5(T) was characterized by physiological, biochemical, and molecular genetic analyses. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain KJ1R5(T) was most closely related to members of the genus Chryseobacterium, and that the strain exhibited the highest similarities with type strains of Chryseobacterium vrystaatense (97.0 %) and Chryseobacterium rhizosphaerae (97.1 %). DNA-DNA hybridization reassociation values between strain KJ1R5(T) and type strains of C. vrystaatense KACC 11675(T) and C. rhizosphaerae KACC 14918(T) were 46.9 and 38.4 %, respectively. The DNA G+C content of KJ1R5(T) is 40.2 mol%. The predominant respiratory quinone of KJ1R5(T) was menaquinone MK-6; major cellular fatty acids were iso-C15 : 0, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), iso-C17 : 1ω9c, and iso-C17 : 0 3-OH. On the basis of these phenotypic and genotypic characteristics, the strain significantly differed from representative strains belonging to the genus Chryseobacterium. Thus, we propose that strain KJ1R5(T) represents a novel species of the genus Chryseobacterium, named Chryseobacterium kwangjuense sp. nov. The type strain is KJ1R5(T) (= KACC 13029(T) = JCM 15904(T)).

摘要

黄色、革兰氏阴性、杆状的细菌 KJ1R5(T)是从韩国光州田间种植的辣椒根部分离出来的。菌株 KJ1R5(T)通过生理、生化和分子遗传分析进行了表征。基于 16S rRNA 基因序列的系统发育分析表明,菌株 KJ1R5(T)与黄杆菌属的成员最为密切相关,并且与 Chryseobacterium vrystaatense (97.0%)和 Chryseobacterium rhizosphaerae (97.1%)的模式菌株最为相似。菌株 KJ1R5(T)与 Chryseobacterium vrystaatense KACC 11675(T)和 Chryseobacterium rhizosphaerae KACC 14918(T)的 DNA-DNA 杂交再结合率分别为 46.9%和 38.4%。KJ1R5(T)的 DNA G+C 含量为 40.2mol%。KJ1R5(T)的主要呼吸醌是menaquinone MK-6;主要的细胞脂肪酸是 iso-C15:0、summed feature 3(C16:1ω7c 和/或 C16:1ω6c)、iso-C17:1ω9c 和 iso-C17:0 3-OH。基于这些表型和基因型特征,该菌株与属于黄杆菌属的代表性菌株明显不同。因此,我们建议菌株 KJ1R5(T)代表黄杆菌属的一个新种,命名为光州黄杆菌(Chryseobacterium kwangjuense)。模式菌株是 KJ1R5(T)=KACC 13029(T)=JCM 15904(T)。

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