Tonge P J, Carey P R
Institute for Biological Sciences, National Research Council of Canada, Ottawa, Ontario.
Biochemistry. 1990 Dec 4;29(48):10723-7. doi: 10.1021/bi00500a002.
Resonance Raman (RR) spectroscopy has been used to obtain the vibrational spectrum of the acyl carbonyl group in a series of acylchymotrypsins and acylsubtilisins at the pH of optimum hydrolysis. The acyl-enzymes, which utilize arylacryloyl acyl groups, include three oxyanion hole mutants of subtilisin BPN', Asn155Leu, Asn155Gln, and Asn155Arg, and encompass a 500-fold range of deacylation rate constants. For each acyl-enzyme a RR carbonyl band has been identified which arises from a population of carbonyl groups undergoing nucleophilic attack in the active site. As the deacylation rate (k3) increases through the series of acyl-enzymes, the carbonyl stretching band (vC = O) is observed to shift to lower frequency, indicating an increase in single bond character of the reactive acyl carbonyl group. Experiments involving the oxyanion hole mutants of subtilisin BPN' indicate that a shift of vC = O to lower frequency results from stronger hydrogen bonding of the acyl carbonyl group in the oxyanion hole. A plot of log k3 against vC = O is linear over the range investigated, demonstrating that the changes in vC = O correlate with the free energy of activation for the deacylation reaction. By use of an empirical correlation between carbonyl frequency (vC = O) and carbonyl bond length (rC = O) it is estimated that rC = O increases by 0.015 A as the deacylation rate increases 500-fold through the series of acyl-enzymes. This change in rC = O is about 7% of that expected for going from a formal C = O double bond in the acyl-enzyme to a formal C-O single bond in the tetrahedral intermediate for deacylation. The data also allow us to estimate the energy needed to extend the acyl carbonyl group along its axis to be 950 kJ mol-1 A-1.
共振拉曼(RR)光谱已被用于在最佳水解pH值下获得一系列酰基胰凝乳蛋白酶和酰基枯草杆菌蛋白酶中酰基羰基的振动光谱。利用芳基丙烯酰基的酰基酶包括枯草杆菌蛋白酶BPN'的三个氧负离子孔突变体,即Asn155Leu、Asn155Gln和Asn155Arg,其脱酰化速率常数范围达500倍。对于每种酰基酶,已鉴定出一条RR羰基带,它来自活性位点中遭受亲核攻击的羰基群体。随着通过一系列酰基酶脱酰化速率(k3)的增加,观察到羰基伸缩带(vC = O)向低频移动,表明反应性酰基羰基的单键特征增加。涉及枯草杆菌蛋白酶BPN'氧负离子孔突变体的实验表明,vC = O向低频移动是由于氧负离子孔中酰基羰基的氢键更强。在所研究的范围内,log k3对vC = O的作图呈线性,表明vC = O的变化与脱酰化反应的活化自由能相关。利用羰基频率(vC = O)与羰基键长(rC = O)之间的经验相关性估计,随着通过一系列酰基酶脱酰化速率增加500倍,rC = O增加0.015 Å。rC = O的这种变化约为从酰基酶中的正式C = O双键到脱酰化四面体中间体中的正式C - O单键预期变化的7%。这些数据还使我们能够估计沿其轴延伸酰基羰基所需的能量为950 kJ mol-1 Å-1。