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普城沙雷氏菌AS12菌株的全基因组序列

Complete genome sequence of Serratia plymuthica strain AS12.

作者信息

Neupane Saraswoti, Finlay Roger D, Alström Sadhna, Goodwin Lynne, Kyrpides Nikos C, Lucas Susan, Lapidus Alla, Bruce David, Pitluck Sam, Peters Lin, Ovchinnikova Galina, Chertkov Olga, Han James, Han Cliff, Tapia Roxanne, Detter John C, Land Miriam, Hauser Loren, Cheng Jan-Fang, Ivanova Natalia, Pagani Ioanna, Klenk Hans-Peter, Woyke Tanja, Högberg Nils

出版信息

Stand Genomic Sci. 2012 May 25;6(2):165-73. doi: 10.4056/sigs.2705996. Epub 2012 May 1.

DOI:10.4056/sigs.2705996
PMID:22768360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3387793/
Abstract

A plant-associated member of the family Enterobacteriaceae, Serratia plymuthica strain AS12 was isolated from rapeseed roots. It is of scientific interest because it promotes plant growth and inhibits plant pathogens. The genome of S. plymuthica AS12 comprises a 5,443,009 bp long circular chromosome, which consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced within the 2010 DOE-JGI Community Sequencing Program (CSP2010) as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens".

摘要

粘质沙雷氏菌AS12菌株是肠杆菌科的一种植物相关菌,从油菜根部分离得到。它具有科学研究价值,因为它能促进植物生长并抑制植物病原体。粘质沙雷氏菌AS12的基因组由一条长度为5,443,009 bp的环状染色体组成,包含4,952个蛋白质编码基因、87个tRNA基因和7个rRNA操纵子。该基因组是在2010年美国能源部联合基因组研究所社区测序计划(CSP2010)中进行测序的,是名为“对植物病原体具有拮抗作用的四种促进油菜生长细菌的基因组学”项目的一部分。

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