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嗜热适度、氨基酸降解和硫还原细菌嗜热栖热放线菌模式菌株(Cas60314(T))的基因组序列

Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)).

作者信息

Göker Markus, Saunders Elisabeth, Lapidus Alla, Nolan Matt, Lucas Susan, Hammon Nancy, Deshpande Shweta, Cheng Jan-Fang, Han Cliff, Tapia Roxanne, Goodwin Lynne A, Pitluck Sam, Liolios Konstantinos, Mavromatis Konstantinos, Pagani Ioanna, Ivanova Natalia, Mikhailova Natalia, Pati Amrita, Chen Amy, Palaniappan Krishna, Land Miriam, Chang Yun-Juan, Jeffries Cynthia D, Brambilla Evelyne-Marie, Rohde Manfred, Spring Stefan, Detter John C, Woyke Tanja, Bristow James, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter

出版信息

Stand Genomic Sci. 2012 May 25;6(2):230-9. doi: 10.4056/sigs.2726028. Epub 2012 May 4.

Abstract

Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum 'Synergistetes'. Members of this relatively recently proposed phylum 'Synergistetes' are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314(T) is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

嗜热栖热菌(Thermovirga lienii),达勒和比克兰德于2006年发现,是“互养菌门”(Synergistetes)中嗜热栖热菌属的成员。这个相对较新提出的“互养菌门”成员因其独特的系统发育位置和多样的栖息地(例如从人类到油井)而备受关注。嗜热栖热菌Cas60314(T)的基因组是该门已发表的第五个基因组序列(第三个完成测序的)。在此,我们描述该生物体的特征,以及完整的基因组序列和注释。这个长度为1,999,646 bp的基因组(包括一个质粒),含有1,914个蛋白质编码基因和59个RNA基因,是“细菌和古菌基因组百科全书”项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2642/3387794/91b213de8b7b/sigs.2726028-f1.jpg

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