Suppr超能文献

大肠杆菌 chitobiose(chb)操纵子的 chbG 基因编码壳二糖寡糖脱乙酰酶。

The chbG gene of the chitobiose (chb) operon of Escherichia coli encodes a chitooligosaccharide deacetylase.

机构信息

Department of Molecular Reproduction, Development and Genetics, Indian Institute of Science, Bangalore, India.

出版信息

J Bacteriol. 2012 Sep;194(18):4959-71. doi: 10.1128/JB.00533-12. Epub 2012 Jul 13.

Abstract

The chb operon of Escherichia coli is involved in the utilization of the β-glucosides chitobiose and cellobiose. The function of chbG (ydjC), the sixth open reading frame of the operon that codes for an evolutionarily conserved protein is unknown. We show that chbG encodes a monodeacetylase that is essential for growth on the acetylated chitooligosaccharides chitobiose and chitotriose but is dispensable for growth on cellobiose and chitosan dimer, the deacetylated form of chitobiose. The predicted active site of the enzyme was validated by demonstrating loss of function upon substitution of its putative metal-binding residues that are conserved across the YdjC family of proteins. We show that activation of the chb promoter by the regulatory protein ChbR is dependent on ChbG, suggesting that deacetylation of chitobiose-6-P and chitotriose-6-P is necessary for their recognition by ChbR as inducers. Strains carrying mutations in chbR conferring the ability to grow on both cellobiose and chitobiose are independent of chbG function for induction, suggesting that gain of function mutations in ChbR allow it to recognize the acetylated form of the oligosaccharides. ChbR-independent expression of the permease and phospho-β-glucosidase from a heterologous promoter did not support growth on both chitobiose and chitotriose in the absence of chbG, suggesting an additional role of chbG in the hydrolysis of chitooligosaccharides. The homologs of chbG in metazoans have been implicated in development and inflammatory diseases of the intestine, indicating that understanding the function of E. coli chbG has a broader significance.

摘要

大肠杆菌的 chb 操纵子参与了 β-葡萄糖苷类物质纤维二糖和纤维三糖的利用。该操纵子的第六个开放阅读框 chbG(ydjC)编码的进化上保守的蛋白质的功能未知。我们发现 chbG 编码一种单脱乙酰酶,该酶对于生长在乙酰化的低聚壳聚糖纤维二糖和纤维三糖上是必需的,但对于生长在纤维二糖和脱乙酰化的纤维二糖形式壳聚糖二聚体上是可有可无的。该酶的预测活性位点通过证明其假定的金属结合残基的功能丧失得到了验证,这些残基在 YdjC 蛋白家族中是保守的。我们表明,调节蛋白 ChbR 对 chb 启动子的激活依赖于 ChbG,这表明 chitobiose-6-P 和 chitotriose-6-P 的脱乙酰化对于它们作为诱导物被 ChbR 识别是必要的。携带赋予在纤维二糖和纤维二糖上生长能力的 chbR 突变的菌株对于诱导不需要 chbG 功能,这表明 ChbR 的功能获得突变使其能够识别低聚糖的乙酰化形式。来自异源启动子的透性酶和磷酸-β-葡萄糖苷酶的 ChbR 独立表达在没有 chbG 的情况下不能支持纤维二糖和纤维三糖的生长,这表明 chbG 在低聚糖水解中具有额外的作用。后生动物中 chbG 的同源物已被牵连到肠道的发育和炎症性疾病中,这表明了解大肠杆菌 chbG 的功能具有更广泛的意义。

相似文献

1
The chbG gene of the chitobiose (chb) operon of Escherichia coli encodes a chitooligosaccharide deacetylase.
J Bacteriol. 2012 Sep;194(18):4959-71. doi: 10.1128/JB.00533-12. Epub 2012 Jul 13.
3
Mutations that alter the regulation of the chb operon of Escherichia coli allow utilization of cellobiose.
Mol Microbiol. 2007 Dec;66(6):1382-95. doi: 10.1111/j.1365-2958.2007.05999.x. Epub 2007 Nov 19.
5
A comparative study of the evolution of cellobiose utilization in Escherichia coli and Shigella sonnei.
Arch Microbiol. 2017 Mar;199(2):247-257. doi: 10.1007/s00203-016-1299-0. Epub 2016 Oct 1.
7
Characterization of a beta-glucoside operon (bgc) prevalent in septicemic and uropathogenic Escherichia coli strains.
Appl Environ Microbiol. 2009 Apr;75(8):2284-93. doi: 10.1128/AEM.02621-08. Epub 2009 Feb 20.
8
Characterization and nucleotide sequence of the cryptic cel operon of Escherichia coli K12.
Genetics. 1990 Mar;124(3):455-71. doi: 10.1093/genetics/124.3.455.
9
Wild-type Escherichia coli grows on the chitin disaccharide, N,N'-diacetylchitobiose, by expressing the cel operon.
Proc Natl Acad Sci U S A. 1997 Dec 23;94(26):14367-71. doi: 10.1073/pnas.94.26.14367.
10
Mechanisms of activation of the cryptic cel operon of Escherichia coli K12.
Genetics. 1990 Mar;124(3):473-82. doi: 10.1093/genetics/124.3.473.

引用本文的文献

2
Customized chitooligosaccharide production-controlling their length engineering of rhizobial chitin synthases and the choice of expression system.
Front Bioeng Biotechnol. 2022 Dec 14;10:1073447. doi: 10.3389/fbioe.2022.1073447. eCollection 2022.
4
A bottom-up approach towards a bacterial consortium for the biotechnological conversion of chitin to L-lysine.
Appl Microbiol Biotechnol. 2021 Feb;105(4):1547-1561. doi: 10.1007/s00253-021-11112-5. Epub 2021 Feb 1.
6
Role of Sphingosylphosphorylcholine in Tumor and Tumor Microenvironment.
Cancers (Basel). 2019 Oct 31;11(11):1696. doi: 10.3390/cancers11111696.
8
Chitin Deacetylases: Structures, Specificities, and Biotech Applications.
Polymers (Basel). 2018 Mar 22;10(4):352. doi: 10.3390/polym10040352.
10
Functional analysis of an unusual porin-like channel that imports chitin for alternative carbon metabolism in .
J Biol Chem. 2017 Nov 24;292(47):19328-19337. doi: 10.1074/jbc.M117.812321. Epub 2017 Sep 27.

本文引用的文献

1
Gene decay in Shigella as an incipient stage of host-adaptation.
PLoS One. 2011;6(11):e27754. doi: 10.1371/journal.pone.0027754. Epub 2011 Nov 16.
3
Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota.
Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17480-5. doi: 10.1073/pnas.1107857108. Epub 2011 Oct 3.
4
Are pathogenic bacteria just looking for food? Metabolism and microbial pathogenesis.
Trends Microbiol. 2011 Jul;19(7):341-8. doi: 10.1016/j.tim.2011.04.003. Epub 2011 May 18.
5
L-fucose utilization provides Campylobacter jejuni with a competitive advantage.
Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):7194-9. doi: 10.1073/pnas.1014125108. Epub 2011 Apr 11.
8
Ethanolamine utilization contributes to proliferation of Salmonella enterica serovar Typhimurium in food and in nematodes.
Appl Environ Microbiol. 2011 Jan;77(1):281-90. doi: 10.1128/AEM.01403-10. Epub 2010 Oct 29.
9
Enterohaemorrhagic Escherichia coli gains a competitive advantage by using ethanolamine as a nitrogen source in the bovine intestinal content.
Environ Microbiol. 2011 Feb;13(2):365-77. doi: 10.1111/j.1462-2920.2010.02334.x. Epub 2010 Sep 16.
10
Sugar metabolism, an additional virulence factor in enterobacteria.
Int J Med Microbiol. 2011 Jan;301(1):1-6. doi: 10.1016/j.ijmm.2010.04.021. Epub 2010 Aug 11.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验