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金株粘细菌(Mucilaginibacter jinjuensis),具有木聚糖降解活性。

Mucilaginibacter jinjuensis sp. nov., with xylan-degrading activity.

机构信息

Division of Applied Life Science (BK 21), Plant Molecular Biology & Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea.

Department of Research & Technology Development, JGreen Inc., Jinju 660-841, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1267-1272. doi: 10.1099/ijs.0.043828-0. Epub 2012 Jul 13.

Abstract

A gram-negative, rod-shaped, pale-orange-pigmented bacterial strain with xylan-degrading activity designated YC7004(T) was isolated from a rotten-wood sample collected at Jinju, Korea, and its taxonomic position was investigated by using a polyphasic approach. The strain grew optimally on R2A medium at 30 °C and at pH 6. The major isoprenoid quinone was MK7 and major fatty acids were summed feature 3, iso-C15 : 0, C16 : 0, iso-C17 : 0 3-OH, iso-C17 : 1ω9c and C16 : 1ω5c. The G+C content of the genomic DNA was 40.0 mol%. Phylogenetic analysis based on the 16S rRNA gene sequences showed that the strain belongs to the genus Mucilaginibacter in the family Sphingobacteriaceae. The most closely related species were Mucilaginibacter daejeonensis (95.5 %), Mucilaginibacter frigoritolerans (94.6 %) and Mucilaginibacter mallensis (94.0 %). Based on the phylogenetic and chemotaxonomic data analyses, strain YC7004(T) represents a novel species of the genus Mucilaginibacter with the proposed name of Mucilaginibacter jinjuensis sp. nov. The type strain is YC7004(T) ( = KACC 16571(T) = NBRC 108856(T)).

摘要

一株具有木聚糖降解活性的革兰氏阴性、杆状、橙黄色色素的细菌菌株 YC7004(T) 从韩国锦州市的腐朽木材样本中分离得到,并通过多相方法研究了其分类地位。该菌株在 R2A 培养基中于 30°C 和 pH 6 下最佳生长。主要异戊二烯醌为 MK7,主要脂肪酸为总和特征 3、iso-C15:0、C16:0、iso-C17:0 3-OH、iso-C17:1ω9c 和 C16:1ω5c。基因组 DNA 的 G+C 含量为 40.0 mol%。基于 16S rRNA 基因序列的系统发育分析表明,该菌株属于鞘氨醇单胞菌科粘质沙雷氏菌属。最密切相关的物种是大田粘质沙雷氏菌(95.5%)、耐寒粘质沙雷氏菌(94.6%)和马氏粘质沙雷氏菌(94.0%)。基于系统发育和化学分类数据分析,菌株 YC7004(T) 代表了粘质沙雷氏菌属的一个新种,命名为锦州市粘质沙雷氏菌。模式菌株为 YC7004(T)(=KACC 16571(T)=NBRC 108856(T))。

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