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人参土栖黏液杆菌新种,从人参田土壤中分离得到。

Mucilaginibacter panaciglaebae sp. nov., isolated from soil of a ginseng field.

作者信息

Lee Soon Youl, Siddiqi Muhammad Zubair, Kim Sang Yong, Yu Hong Shan, Lee Jae Hak, Im Wan-Taek

机构信息

Department of Biotechnology, Hankyong National University, 327 Chungang-no Anseong-si, Kyonggi-do 17579, Republic of Korea.

Center for Genetic Information, Graduate School of Bio and Information Technology, Hankyong, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Jan;68(1):149-154. doi: 10.1099/ijsem.0.002473. Epub 2017 Nov 14.

Abstract

A Gram-reaction-negative, strictly aerobic, non-motile and rod-shaped bacterium, designated strain BXN5-31, was isolated from soil of a ginseng field, and its taxonomic position was investigated using a polyphasic approach. Strain BXN5-31 grew at 18-37 °C and at pH 6.0-8.0 on R2A medium. Based on 16S rRNA gene sequence similarity, strain BXN5-31 was shown to belong to the genus Mucilaginibacter and was closely related to Mucilaginibactersoyangensis HME6664, Mucilaginibacterximonensis XM-003 and Mucilaginibacterpuniceus WS71. The DNA G+C content was 43.6 %. The predominant respiratory quinone was menaquinone 7 (MK-7) and the major fatty acids were iso-C15 : 0, iso-C17 : 0 3-OH and summed feature 3 (comprising C16 : 1ω6c and/or C16 : 1ω7c). The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and phosphatidylethanolamine. The DNA-DNA hybridization values between strain BXN5-31 and three reference strains (M. soyangensis HME6664, M. ximonensis XM-003 and M. puniceus WS71) were 9.4±1.9, 8.2±1.3 and 5.7±0.7 %, respectively. The DNA G+C content and chemotaxonomic data supported the affiliation of strain BXN5-31 to the genus Mucilaginibacter. Moreover, the physiological and biochemical results and low level of DNA-DNA relatedness allowed the phenotypic and genotypic differentiation of strain BXN5-31 from recognized species of the genus Mucilaginibacter. The isolate therefore represents a novel species, for which the name Mucilaginibacter panaciglaebae sp. nov. is proposed. The type strain is BXN5-31 (=KACC 14957=JCM 17085).

摘要

从人参田土壤中分离出一株革兰氏阴性、严格需氧、无运动性的杆状细菌,命名为菌株BXN5-31,并采用多相分类法研究其分类地位。菌株BXN5-31在R2A培养基上于18-37 °C和pH 6.0-8.0条件下生长。基于16S rRNA基因序列相似性,菌株BXN5-31被证明属于黏液杆菌属,与大豆黏液杆菌HME6664、西莫黏液杆菌XM-003和石榴红黏液杆菌WS71密切相关。DNA G+C含量为43.6 %。主要呼吸醌为甲基萘醌7(MK-7),主要脂肪酸为异-C15 : 0、异-C17 : 0 3-OH和特征性总和3(包括C16 : 1ω6c和/或C16 : 1ω7c)。主要极性脂为磷脂酰甘油、双磷脂酰甘油和磷脂酰乙醇胺。菌株BXN5-31与三株参比菌株(大豆黏液杆菌HME6664、西莫黏液杆菌XM-003和石榴红黏液杆菌WS71)之间的DNA-DNA杂交值分别为9.4±1.9、8.2±1.3 和5.7±0.7 %。DNA G+C含量和化学分类数据支持菌株BXN5-31属于黏液杆菌属。此外,生理生化结果以及低水平的DNA-DNA相关性使得菌株BXN5-31能够与黏液杆菌属已确认的物种在表型和基因型上区分开来。因此,该分离物代表一个新物种,提议将其命名为泛人参黏液杆菌(Mucilaginibacter panaciglaebae sp. nov.)。模式菌株为BXN5-31(=KACC 14957=JCM 17085)。

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