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短链 NAD(H)-依赖性脱氢酶/还原酶的重组 Sulfolobus acidocaldarius 的生化和结构特征,对二芳基二酮苯甲酰具有高度对映选择性。

Biochemical and structural characterization of recombinant short-chain NAD(H)-dependent dehydrogenase/reductase from Sulfolobus acidocaldarius highly enantioselective on diaryl diketone benzil.

机构信息

Istituto di Biochimica delle Proteine, CNR, Via P. Castellino 111, 80131 Naples, Italy.

出版信息

Appl Microbiol Biotechnol. 2013 May;97(9):3949-64. doi: 10.1007/s00253-012-4273-z. Epub 2012 Jul 18.

DOI:10.1007/s00253-012-4273-z
PMID:22805786
Abstract

The gene encoding a novel alcohol dehydrogenase that belongs to the short-chain dehydrogenases/reductases superfamily was identified in the aerobic thermoacidophilic crenarchaeon Sulfolobus acidocaldarius strain DSM 639. The saadh2 gene was heterologously overexpressed in Escherichia coli, and the resulting protein (SaADH2) was purified to homogeneity and both biochemically and structurally characterized. The crystal structure of the SaADH2 NADH-bound form reveals that the enzyme is a tetramer consisting of identical 27,024-Da subunits, each composed of 255 amino acids. The enzyme has remarkable thermophilicity and thermal stability, displaying activity at temperatures up to 80 °C and a 30-min half-inactivation temperature of ∼88 °C. It also shows good tolerance to common organic solvents and a strict requirement for NAD(H) as the coenzyme. SaADH2 displays a preference for the reduction of alicyclic, bicyclic and aromatic ketones and α-ketoesters, but is poorly active on aliphatic, cyclic and aromatic alcohols, showing no activity on aldehydes. Interestingly, the enzyme catalyses the asymmetric reduction of benzil to (R)-benzoin with both excellent conversion (98 %) and optical purity (98 %) by way of an efficient in situ NADH-recycling system involving a second thermophilic ADH. The crystal structure of the binary complex SaADH2-NADH, determined at 1.75 Å resolution, reveals details of the active site providing hints on the structural basis of the enzyme enantioselectivity.

摘要

在需氧嗜热嗜酸古菌 Sulfolobus acidocaldarius 菌株 DSM 639 中鉴定出编码属于短链脱氢酶/还原酶超家族的新型醇脱氢酶的基因。saadh2 基因在大肠杆菌中异源过表达,所得蛋白(SaADH2)被纯化至均一性,并进行了生化和结构表征。SaADH2 NADH 结合形式的晶体结构表明,该酶是由相同的 27,024-Da 亚基组成的四聚体,每个亚基由 255 个氨基酸组成。该酶具有显著的嗜热性和热稳定性,在高达 80°C 的温度下具有活性,30 分钟半衰期约为 88°C。它还对常见有机溶剂具有良好的耐受性和对 NAD(H)作为辅酶的严格要求。SaADH2 优先还原脂环族、双环族和芳香族酮和α-酮酯,但对脂肪族、环状和芳香族醇活性差,对醛无活性。有趣的是,该酶通过涉及第二种嗜热 ADH 的高效原位 NADH 再生系统,催化苯偶酰的不对称还原为(R)-苯偶姻,转化率(98%)和光学纯度(98%)都非常高。二元复合物 SaADH2-NADH 的晶体结构,分辨率为 1.75 Å,揭示了活性位点的细节,为酶的立体选择性提供了结构基础的线索。

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