Key Laboratory of Agricultural and Environmental Microbiology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, China.
PLoS One. 2012;7(7):e38701. doi: 10.1371/journal.pone.0038701. Epub 2012 Jul 9.
Gentisate (2,5-dihydroxybenzoate) is a key ring-cleavage substrate involved in various aromatic compounds degradation. Corynebacterium glutamicum ATCC13032 is capable of growing on gentisate and genK was proposed to encode a transporter involved in this utilization by its disruption in the restriction-deficient mutant RES167. Its biochemical characterization by uptake assay using [(14)C]-labeled gentisate has not been previously reported.
METHODOLOGY/PRINCIPAL FINDINGS: In this study, biochemical characterization of GenK by uptake assays with [(14)C]-labeled substrates demonstrated that it specifically transported gentisate into the cells with V(max) and K(m) of 3.06 ± 0.16 nmol/min/mg of dry weight and 10.71 ± 0.11 µM respectively, and no activity was detected for either benzoate or 3-hydoxybenzoate. When GenK was absent in strain RES167 ΔgenK, it retained 85% of its original transport activity at pH 6.5 compared to that of strain RES167. However, it lost 79% and 88% activity at pH 7.5 and 8.0, respectively. A number of competing substrates, including 3-hydroxybenzoate, benzoate, protocatechuate and catechol, significantly inhibited gentisate uptake by more than 40%. Through site-directed mutagenesis, eight amino acid residues of GenK, Asp-54, Asp-57 and Arg-386 in the hydrophobic transmembrane regions and Arg-103, Trp-309, Asp-312, Arg-313 and Ile-317 in the hydrophilic cytoplasmic loops were shown to be important for gentisate transport. When conserved residues Asp-54 and Asp-57 respectively were changed to glutamate, both mutants retained approximately 50% activity and were able to partially complement the ability of strain RES167 ΔgenK to grow on gentisate.
CONCLUSIONS/SIGNIFICANCE: Our results demonstrate that GenK is an active gentisate transporter in Corynebacterium glutamicum ATCC13032. The GenK-mediated gentisate transport was also shown to be a limiting step for the gentisate utilization by this strain. This enhances our understanding of gentisate transport in the microbial degradation of aromatic compounds.
龙胆酸(2,5-二羟基苯甲酸)是参与各种芳香化合物降解的关键环裂解底物。谷氨酸棒杆菌 ATCC13032 能够在龙胆酸上生长,并且 genK 被提议编码一种转运蛋白,通过在限制缺陷突变体 RES167 中的破坏参与这种利用。其通过使用 [(14)C]-标记的龙胆酸的摄取测定进行的生化表征以前尚未报道过。
方法/主要发现:在这项研究中,通过用 [(14)C]-标记的底物进行摄取测定对 GenK 的生化特性进行了表征,结果表明它特异性地将龙胆酸运输到细胞中,其 V(max)和 K(m)分别为 3.06 ± 0.16 nmol/min/mg 干重和 10.71 ± 0.11 µM,并且没有检测到苯甲酸或 3-羟基苯甲酸的活性。当 RES167ΔgenK 菌株中不存在 GenK 时,与 RES167 菌株相比,其在 pH 6.5 时保留了其原始转运活性的 85%。然而,它在 pH 7.5 和 8.0 时分别失去了 79%和 88%的活性。许多竞争性底物,包括 3-羟基苯甲酸、苯甲酸、原儿茶酸和儿茶酚,对龙胆酸的摄取有超过 40%的显著抑制作用。通过定点突变,GenK 的八个氨基酸残基,疏水性跨膜区中的 Asp-54 和 Asp-57 以及亲水区中的 Arg-103、Trp-309、Asp-312、Arg-313 和 Ile-317,对于龙胆酸的转运是重要的。当保守残基 Asp-54 和 Asp-57 分别被谷氨酸取代时,两个突变体都保留了大约 50%的活性,并能够部分补充 RES167ΔgenK 菌株在龙胆酸上生长的能力。
结论/意义:我们的结果表明,GenK 是谷氨酸棒杆菌 ATCC13032 中活性龙胆酸转运蛋白。GenK 介导的龙胆酸转运也被证明是该菌株利用龙胆酸的限制步骤。这增强了我们对微生物降解芳香化合物中龙胆酸转运的理解。