Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan.
J Phys Chem B. 2012 Sep 6;116(35):10703-14. doi: 10.1021/jp304925a. Epub 2012 Aug 23.
Because voltage-gated ion channels play critical biological roles, understanding how they can discriminate the native metal ion from rival cations in the milieu is of great interest. Although Ca(2+), Mg(2+), and Na(+) are present in comparable concentrations outside the cell, the factors governing the competition among these cations for the selectivity filter of voltage-gated Ca(2+) ion channel remain unclear. Using density functional theory combined with continuum dielectric methods, we evaluate the effect of (1) the number, chemical type, and charge of the ligands lining the pore, (2) the pore's rigidity, size, symmetry, and solvent accessibility, and (3) the Ca(2+) hydration number outside the selectivity filter on the competition among Ca(2+), Mg(2+), and Na(+) in model selectivity filters. The calculations show how the outcome of this competition depends on the interplay between electronic and solvation effects. Selectivity for monovalent Na(+) over divalent Ca(2+)/Mg(2+) is achieved when solvation effects outweigh electrostatic effects; thus filters comprising a few weak charge-donating groups such as Ser/Thr side chains, where electrostatic effects are relatively weak and are easily overcome by solvation effects, are Na(+)-selective. In contrast, selectivity for divalent Ca(2+)/Mg(2+) over monovalent Na(+) is achieved when metal-ligand electrostatic effects outweigh solvation effects. The key differences in selectivity between Mg(2+) and Ca(2+) lie in the pore size, oligomericity, and solvent accessibility. The results, which are consistent with available experimental data, reveal how the structure and composition of the ion channel selectivity pore had adapted to the specific physicochemical properties of the native metal ion to enhance the competitiveness of the native metal toward rival cations.
由于电压门控离子通道在生物学中起着至关重要的作用,因此了解它们如何区分环境中的天然金属离子与竞争阳离子具有重要意义。尽管细胞外的 Ca(2+)、Mg(2+)和 Na(+) 浓度相当,但控制这些阳离子在电压门控 Ca(2+)离子通道的选择性过滤器中竞争的因素仍不清楚。我们使用密度泛函理论结合连续介电方法,评估了以下因素对竞争的影响:(1) 排列在孔中的配体的数量、化学类型和电荷;(2) 孔的刚性、大小、对称性和溶剂可及性;(3) 选择性过滤器外的 Ca(2+)水合数。计算结果表明,这种竞争的结果取决于电子和溶剂化效应的相互作用。当溶剂化效应超过静电效应时,模型选择性过滤器中 Ca(2+)、Mg(2+)和 Na(+) 的竞争会导致单价 Na(+)优先于二价 Ca(2+)/Mg(2+);因此,由几个弱供电子基团(如 Ser/Thr 侧链)组成的过滤器,其中静电效应相对较弱,很容易被溶剂化效应克服,是 Na(+)选择性的。相比之下,当金属-配体静电效应超过溶剂化效应时,会导致二价 Ca(2+)/Mg(2+)优先于单价 Na(+)。Mg(2+)和 Ca(2+)之间选择性的关键区别在于孔径、寡聚性和溶剂可及性。这些结果与现有实验数据一致,揭示了离子通道选择性孔的结构和组成如何适应天然金属离子的特定物理化学性质,以增强天然金属对竞争阳离子的竞争力。