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关于光合细胞色素 b6f 复合物中电子转移的速率限制。

On rate limitations of electron transfer in the photosynthetic cytochrome b6f complex.

机构信息

Department of Biological Sciences, Hockmeyer Hall of Structural Biology, Purdue University, West Lafayette, IN 47907, USA.

出版信息

Phys Chem Chem Phys. 2012 Oct 28;14(40):13853-60. doi: 10.1039/c2cp41386h. Epub 2012 Aug 14.

Abstract

Considering information in the crystal structures of the cytochrome b(6)f complex relevant to the rate-limiting step in oxygenic photosynthesis, it is enigmatic that electron transport in the complex is not limited by the large distance, approximately 26 Å, between the iron-sulfur cluster (ISP) and its electron acceptor, cytochrome f. This enigma has been explained for the respiratory bc(1) complex by a crystal structure with a greatly shortened cluster-heme c(1) distance, leading to a concept of ISP dynamics in which the ISP soluble domain undergoes a translation-rotation conformation change and oscillates between positions relatively close to the cyt c(1) heme and a membrane-proximal position close to the ubiquinol electron-proton donor. Comparison of cytochrome b(6)f structures shows a variation in cytochrome f heme position that suggests the possibility of flexibility and motion of the extended cytochrome f structure that could entail a transient decrease in cluster-heme f distance. The dependence of cyt f turnover on lumen viscosity is consistent with a role of ISP - cyt f dynamics in determination of the rate-limiting step under conditions of low light intensity. Under conditions of low light intensity and proton electrochemical gradient present, for example, under a leaf canopy, it is proposed that a rate limitation of electron transport in the b(6)f complex may also arise from steric constraints in the entry/exit portal for passage of the plastoquinol and -quinone to/from its oxidation site proximal to the iron-sulfur cluster.

摘要

考虑到与氧合光合作用限速步骤相关的细胞色素 b(6)f 复合物晶体结构中的信息,令人费解的是,复合物中的电子传递不受铁硫簇 (ISP) 和其电子受体细胞色素 f 之间约 26 Å 的大距离限制。这种谜团已经通过呼吸 bc(1) 复合物的晶体结构得到了解释,该晶体结构中的簇血红素 c(1) 距离大大缩短,导致 ISP 动力学的概念,其中 ISP 可溶性结构域经历翻译-旋转构象变化,并在相对靠近 cyt c(1) 血红素的位置和靠近 ubiquinol 电子质子供体的膜近端位置之间振荡。细胞色素 b(6)f 结构的比较表明细胞色素 f 血红素位置的变化表明扩展细胞色素 f 结构的灵活性和运动的可能性,这可能导致簇血红素 f 距离的瞬时降低。细胞色素 f 周转率对腔粘度的依赖性与 ISP - cyt f 动力学在低光强条件下确定限速步骤的作用一致。例如,在低光强和质子电化学梯度存在的条件下,例如在叶冠下,据推测,b(6)f 复合物中电子传递的速率限制也可能来自通过进入/退出门户的质体醌和 - 醌向/从其靠近铁硫簇的氧化部位的传递的空间限制。

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