Cunliffe Alexandra R, Al-Hallaq Hania A, Labby Zacariah E, Pelizzari Charles A, Straus Christopher, Sensakovic William F, Ludwig Michelle, Armato Samuel G
Department of Radiology, The University of Chicago, Chicago, Illinois 60637, USA.
Med Phys. 2012 Aug;39(8):4679-90. doi: 10.1118/1.4730505.
The aim of this study was to quantify the effect of four image registration methods on lung texture features extracted from serial computed tomography (CT) scans obtained from healthy human subjects.
Two chest CT scans acquired at different time points were collected retrospectively for each of 27 patients. Following automated lung segmentation, each follow-up CT scan was registered to the baseline scan using four algorithms: (1) rigid, (2) affine, (3) B-splines deformable, and (4) demons deformable. The registration accuracy for each scan pair was evaluated by measuring the Euclidean distance between 150 identified landmarks. On average, 1432 spatially matched 32 × 32-pixel region-of-interest (ROI) pairs were automatically extracted from each scan pair. First-order, fractal, Fourier, Laws' filter, and gray-level co-occurrence matrix texture features were calculated in each ROI, for a total of 140 features. Agreement between baseline and follow-up scan ROI feature values was assessed by Bland-Altman analysis for each feature; the range spanned by the 95% limits of agreement of feature value differences was calculated and normalized by the average feature value to obtain the normalized range of agreement (nRoA). Features with small nRoA were considered "registration-stable." The normalized bias for each feature was calculated from the feature value differences between baseline and follow-up scans averaged across all ROIs in every patient. Because patients had "normal" chest CT scans, minimal change in texture feature values between scan pairs was anticipated, with the expectation of small bias and narrow limits of agreement.
Registration with demons reduced the Euclidean distance between landmarks such that only 9% of landmarks were separated by ≥1 mm, compared with rigid (98%), affine (95%), and B-splines (90%). Ninety-nine of the 140 (71%) features analyzed yielded nRoA > 50% for all registration methods, indicating that the majority of feature values were perturbed following registration. Nineteen of the features (14%) had nRoA < 15% following demons registration, indicating relative feature value stability. Student's t-tests showed that the nRoA of these 19 features was significantly larger when rigid, affine, or B-splines registration methods were used compared with demons registration. Demons registration yielded greater normalized bias in feature value change than B-splines registration, though this difference was not significant (p = 0.15).
Demons registration provided higher spatial accuracy between matched anatomic landmarks in serial CT scans than rigid, affine, or B-splines algorithms. Texture feature changes calculated in healthy lung tissue from serial CT scans were smaller following demons registration compared with all other algorithms. Though registration altered the values of the majority of texture features, 19 features remained relatively stable after demons registration, indicating their potential for detecting pathologic change in serial CT scans. Combined use of accurate deformable registration using demons and texture analysis may allow for quantitative evaluation of local changes in lung tissue due to disease progression or treatment response.
本研究旨在量化四种图像配准方法对从健康人体受试者的系列计算机断层扫描(CT)中提取的肺纹理特征的影响。
回顾性收集了27例患者在不同时间点采集的两次胸部CT扫描图像。在自动肺分割之后,使用四种算法将每次随访CT扫描与基线扫描进行配准:(1)刚体配准,(2)仿射配准,(3)B样条可变形配准,以及(4) demons可变形配准。通过测量150个已识别地标之间的欧几里得距离来评估每个扫描对的配准精度。平均而言,从每个扫描对中自动提取1432个空间匹配的32×32像素感兴趣区域(ROI)对。在每个ROI中计算一阶、分形、傅里叶、Laws滤波器和灰度共生矩阵纹理特征,共计140个特征。通过对每个特征进行Bland-Altman分析来评估基线和随访扫描ROI特征值之间的一致性;计算特征值差异的95%一致性界限所跨越的范围,并通过平均特征值进行归一化以获得归一化一致性范围(nRoA)。nRoA小的特征被认为是“配准稳定的”。根据每个患者所有ROI中基线和随访扫描之间的特征值差异计算每个特征的归一化偏差。由于患者的胸部CT扫描为“正常”,预计扫描对之间纹理特征值的变化最小,偏差小且一致性界限窄。
与刚体配准(98%)、仿射配准(95%)和B样条配准(90%)相比,使用demons配准可减小地标之间的欧几里得距离,使得只有9%的地标间距≥1mm。在分析的140个特征中,有99个(71%)特征在所有配准方法下的nRoA>50%,表明大多数特征值在配准后受到干扰。19个特征(14%)在demons配准后的nRoA<15%,表明相对特征值稳定性。学生t检验表明,与demons配准相比,使用刚体、仿射或B样条配准方法时,这19个特征的nRoA显著更大。Demons配准在特征值变化方面产生的归一化偏差比B样条配准更大,尽管这种差异不显著(p = 0.15)。
与刚体、仿射或B样条算法相比,demons配准在系列CT扫描中匹配的解剖地标之间提供了更高的空间精度。与所有其他算法相比,使用demons配准后从系列CT扫描计算的健康肺组织纹理特征变化更小。尽管配准改变了大多数纹理特征的值,但19个特征在demons配准后仍相对稳定,表明它们在检测系列CT扫描中的病理变化方面具有潜力。结合使用基于demons的精确可变形配准和纹理分析,可能允许对由于疾病进展或治疗反应导致的肺组织局部变化进行定量评估。