Paris Descartes University, INSERM U1016, Institut Cochin, Sorbonne Paris Cité, Paris, France.
Ann Rheum Dis. 2012 Nov;71(11):1900-3. doi: 10.1136/annrheumdis-2012-201755. Epub 2012 Aug 15.
Systemic sclerosis (SSc)-related pulmonary arterial hypertension (PAH) has emerged as a major mortality prognostic factor. Mutations of transforming growth factor beta (TGFβ) receptor genes strongly contribute to idiopathic and familial PAH.
To explore the genetic bases of SSc-PAH, we combined direct sequencing and genotyping of candidate genes encoding TGFβ receptor family members.
TGFβ receptor genes, BMPR2, ALK1, TGFR2 and ENG, were sequenced in 10 SSc-PAH patients, nine SSc and seven controls. In addition, 22 single-nucleotide polymorphisms (SNP) of these four candidate genes were tested for association in a first set of 824 French Caucasian SSc patients (including 54 SSc-PAH) and 939 controls. The replication set consisted of 1516 European SSc (including 219 SSc-PAH) and 3129 controls from the European League Against Rheumatism Scleroderma Trials and Research group network.
No mutation was identified by direct sequencing. However, two repertoried SNP, ENG rs35400405 and ALK1 rs2277382, were found in SSc-PAH patients only. The genotyping of 22 SNP including the latter showed that only rs2277382 was associated with SSc-PAH (p=0.0066, OR 2.13, 95% CI 1.24 to 3.65). Nevertheless, this was not replicated with the following result in combined analysis: p=0.123, OR 0.79, 95% CI 0.59 to 1.07.
This study demonstrates the lack of association between these TGFβ receptor gene polymorphisms and SSc-PAH using both sequencing and genotyping methods.
系统性硬化症(SSc)相关肺动脉高压(PAH)已成为一个主要的死亡预后因素。转化生长因子β(TGFβ)受体基因突变强烈导致特发性和家族性 PAH。
为了探索 SSc-PAH 的遗传基础,我们结合了直接测序和候选基因编码 TGFβ 受体家族成员的基因分型。
在 10 名 SSc-PAH 患者、9 名 SSc 患者和 7 名对照中,对 TGFβ 受体基因、BMPR2、ALK1、TGFR2 和 ENG 进行了测序。此外,对这四个候选基因的 22 个单核苷酸多态性(SNP)在第一组 824 名法国白种人 SSc 患者(包括 54 名 SSc-PAH)和 939 名对照中进行了关联测试。复制组由来自欧洲抗风湿病联盟 Scleroderma Trials and Research group 网络的 1516 名欧洲 SSc(包括 219 名 SSc-PAH)和 3129 名对照组成。
直接测序未发现突变。然而,ENG rs35400405 和 ALK1 rs2277382 这两个已报告的 SNP 仅在 SSc-PAH 患者中发现。对包括后者在内的 22 个 SNP 的基因分型显示,只有 rs2277382 与 SSc-PAH 相关(p=0.0066,OR 2.13,95%CI 1.24 至 3.65)。然而,在联合分析中,这一结果并未得到复制:p=0.123,OR 0.79,95%CI 0.59 至 1.07。
本研究使用测序和基因分型方法证明了这些 TGFβ 受体基因多态性与 SSc-PAH 之间缺乏关联。