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墨西哥太平洋地区 Aplysina 属(Demospongiae:Verongida)的综合分类学和分子系统发育。

Integrative taxonomy and molecular phylogeny of genus Aplysina (Demospongiae: Verongida) from Mexican Pacific.

机构信息

Unidad Académica Mazatlán, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Mazatlán Sinaloa, México.

出版信息

PLoS One. 2012;7(8):e42049. doi: 10.1371/journal.pone.0042049. Epub 2012 Aug 13.

Abstract

Integrative taxonomy provides a major approximation to species delimitation based on integration of different perspectives (e.g. morphology, biochemistry and DNA sequences). The aim of this study was to assess the relationships and boundaries among Eastern Pacific Aplysina species using morphological, biochemical and molecular data. For this, a collection of sponges of the genus Aplysina from the Mexican Pacific was studied on the basis of their morphological, chemical (chitin composition), and molecular markers (mitochondrial COI and nuclear ribosomal rDNA: ITS1-5.8-ITS2). Three morphological species were identified, two of which are new to science. A. clathrata sp. nov. is a yellow to yellow-reddish or -brownish sponge, characterized by external clathrate-like morphology; A. revillagigedi sp. nov. is a lemon yellow to green, cushion-shaped sometimes lobate sponge, characterized by conspicuous oscules, which are slightly elevated and usually linearly distributed on rims; and A. gerardogreeni a known species distributed along the Mexican Pacific coast. Chitin was identified as the main structural component within skeletons of the three species using FTIR, confirming that it is shared among Verongida sponges. Morphological differences were confirmed by DNA sequences from nuclear ITS1-5.8-ITS2. Mitochondrial COI sequences showed extremely low but diagnostic variability for Aplysina revillagigedi sp. nov., thus our results corroborate that COI has limited power for DNA-barcoding of sponges and should be complemented with other markers (e.g. rDNA). Phylogenetic analyses of Aplysina sequences from the Eastern Pacific and Caribbean, resolved two allopatric and reciprocally monophyletic groups for each region. Eastern Pacific species were grouped in general accordance with the taxonomic hypothesis based on morphological characters. An identification key of Eastern Pacific Aplysina species is presented. Our results constitute one of the first approximations to integrative taxonomy, phylogeny and evolutionary biogeography of Eastern Pacific marine sponges; an approach that will significantly contribute to our better understanding of their diversity and evolutionary history.

摘要

整合分类学提供了一种基于不同视角(例如形态学、生物化学和 DNA 序列)整合的物种划分的主要方法。本研究旨在使用形态学、生物化学和分子数据评估东太平洋 Aplysina 物种之间的关系和边界。为此,对来自墨西哥太平洋的 Aplysina 属海绵进行了研究,其基础是它们的形态学、化学(几丁质组成)和分子标记(线粒体 COI 和核核糖体 rDNA:ITS1-5.8-ITS2)。鉴定出三种形态物种,其中两种为新种。A. clathrata sp. nov. 是一种黄色到黄红色或棕色的海绵,其特征为外部格子状形态;A. revillagigedi sp. nov. 是一种柠檬黄色到绿色、垫状有时有叶状的海绵,其特征为明显的孔口,略微凸起,通常在线性分布在边缘上;A. gerardogreeni 是一种已知的分布在墨西哥太平洋沿岸的物种。使用 FTIR 鉴定了三种物种的骨架中的主要结构成分是几丁质,证实它在 Verongida 海绵中是共有的。形态差异通过核 ITS1-5.8-ITS2 的 DNA 序列得到证实。线粒体 COI 序列显示 Aplysina revillagigedi sp. nov. 的变异性极低但具有诊断性,因此我们的结果证实 COI 对海绵的 DNA 条形码作用有限,应该与其他标记(例如 rDNA)互补。来自东太平洋和加勒比海的 Aplysina 序列的系统发育分析,为每个地区分别解决了两个地理上隔离且相互单系的群体。东太平洋的物种通常按照基于形态特征的分类学假设进行分组。提出了东太平洋 Aplysina 物种的鉴定关键。我们的结果是东太平洋海洋海绵综合分类学、系统发育和进化生物地理学的首次近似之一;这种方法将极大地有助于我们更好地了解它们的多样性和进化历史。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b08/3418280/cb7ba9e044cf/pone.0042049.g001.jpg

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