Suppr超能文献

一个常染色体显性遗传的圆锥-杆状细胞营养不良的新基因座定位于 10q 染色体上。

A novel locus for autosomal dominant cone-rod dystrophy maps to chromosome 10q.

机构信息

Department of Cellular Therapy and Regenerative Medicine, CSIC-CABIMER, Seville, Spain.

出版信息

Eur J Hum Genet. 2013 Mar;21(3):338-42. doi: 10.1038/ejhg.2012.158. Epub 2012 Aug 29.

Abstract

Here we report recruitment of a three-generation Romani (Gypsy) family with autosomal dominant cone-rod dystrophy (adCORD). Involvement of known adCORD genes was excluded by microsatellite (STR) genotyping and linkage analysis. Subsequently, two independent total-genome scans using STR markers and single-nucleotide polymorphisms (SNPs) were performed. Haplotype analysis revealed a single 6.7-Mb novel locus between markers D10S1757 and D10S1782 linked to the disease phenotype on chromosome 10q26. Linkage analysis gave a maximum LOD score of 3.31 for five fully informative STR markers within the linked interval corresponding to the expected maximum in the family. Multipoint linkage analysis of SNP genotypes yielded a maximum parametric linkage score of 2.71 with markers located in the same chromosomal interval. There is no previously mapped CORD locus in this interval, and therefore the data reported here is novel and likely to identify a new gene that may eventually contribute to new knowledge on the pathogenesis of this condition. Sequencing of several candidate genes within the mapped interval led to negative findings in terms of the underlying molecular pathogenesis of the disease in the family. Analysis by comparative genomic hybridization excluded large chromosomal aberrations as causative of adCORD in the pedigree.

摘要

我们在此报告一个三世代的罗马尼亚(吉普赛)家族常染色体显性遗传性视锥-视杆营养不良(adCORD)的发病情况。通过微卫星(STR)基因分型和连锁分析排除了已知的 adCORD 基因的参与。随后,使用 STR 标记和单核苷酸多态性(SNP)进行了两次独立的全基因组扫描。单体型分析显示,在 10q26 染色体上,在标记 D10S1757 和 D10S1782 之间存在一个 6.7Mb 的新的单倍型,与疾病表型相关。连锁分析显示,在连锁区间内的五个完全信息 STR 标记的最大 LOD 得分是 3.31,这与家族中的预期最大值一致。SNP 基因型的多点连锁分析得到了一个最大的参数连锁得分 2.71,标记位于相同的染色体区间内。在这个区间内没有以前映射的 CORD 基因座,因此报告的数据是新颖的,可能会识别出一个新的基因,最终可能有助于了解这种疾病的发病机制。对该映射区间内的几个候选基因进行测序,在该家族疾病的潜在分子发病机制方面未发现阳性结果。比较基因组杂交分析排除了大的染色体异常作为该家族 adCORD 的致病原因。

相似文献

1
A novel locus for autosomal dominant cone-rod dystrophy maps to chromosome 10q.
Eur J Hum Genet. 2013 Mar;21(3):338-42. doi: 10.1038/ejhg.2012.158. Epub 2012 Aug 29.
2
A novel locus (CORD12) for autosomal dominant cone-rod dystrophy on chromosome 2q24.2-2q33.1.
BMC Med Genet. 2011 Apr 15;12:54. doi: 10.1186/1471-2350-12-54.
3
An eighth locus for autosomal dominant retinitis pigmentosa is linked to chromosome 17q.
Hum Mol Genet. 1995 Aug;4(8):1459-62. doi: 10.1093/hmg/4.8.1459.
5
Localisation of a gene for dominant cone-rod dystrophy (CORD6) to chromosome 17p.
Hum Mol Genet. 1997 Apr;6(4):597-600. doi: 10.1093/hmg/6.4.597.
6
9
A new locus for autosomal dominant retinitis pigmentosa on chromosome 7p.
Nat Genet. 1993 May;4(1):51-3. doi: 10.1038/ng0593-51.

引用本文的文献

1
Novel eye genes systematically discovered through an integrated analysis of mouse transcriptomes and phenome.
Comput Struct Biotechnol J. 2019 Dec 27;18:73-82. doi: 10.1016/j.csbj.2019.12.009. eCollection 2020.
2
An atlas of gene expression and gene co-regulation in the human retina.
Nucleic Acids Res. 2016 Jul 8;44(12):5773-84. doi: 10.1093/nar/gkw486. Epub 2016 May 27.
3
A novel CRX mutation by whole-exome sequencing in an autosomal dominant cone-rod dystrophy pedigree.
Int J Ophthalmol. 2015 Dec 18;8(6):1112-7. doi: 10.3980/j.issn.2222-3959.2015.06.06. eCollection 2015.
4
Clinical characteristics and current therapies for inherited retinal degenerations.
Cold Spring Harb Perspect Med. 2014 Oct 16;5(2):a017111. doi: 10.1101/cshperspect.a017111.

本文引用的文献

2
A novel genetic study of Chinese families with autosomal recessive retinitis pigmentosa.
Ann Hum Genet. 2007 May;71(Pt 3):281-94. doi: 10.1111/j.1469-1809.2006.00333.x. Epub 2006 Nov 29.
4
Mutations in the CEP290 (NPHP6) gene are a frequent cause of Leber congenital amaurosis.
Am J Hum Genet. 2006 Sep;79(3):556-61. doi: 10.1086/507318. Epub 2006 Jul 11.
5
Progressive cone and cone-rod dystrophies: phenotypes and underlying molecular genetic basis.
Surv Ophthalmol. 2006 May-Jun;51(3):232-58. doi: 10.1016/j.survophthal.2006.02.007.
6
A newly discovered founder population: the Roma/Gypsies.
Bioessays. 2005 Oct;27(10):1084-94. doi: 10.1002/bies.20287.
7
easyLINKAGE-Plus--automated linkage analyses using large-scale SNP data.
Bioinformatics. 2005 Sep 1;21(17):3565-7. doi: 10.1093/bioinformatics/bti571. Epub 2005 Jul 12.
8
HaploPainter: a tool for drawing pedigrees with complex haplotypes.
Bioinformatics. 2005 Apr 15;21(8):1730-2. doi: 10.1093/bioinformatics/bth488. Epub 2004 Sep 17.
9
easyLINKAGE: a PERL script for easy and automated two-/multi-point linkage analyses.
Bioinformatics. 2005 Feb 1;21(3):405-7. doi: 10.1093/bioinformatics/bti009. Epub 2004 Sep 3.
10
Mutation history of the roma/gypsies.
Am J Hum Genet. 2004 Oct;75(4):596-609. doi: 10.1086/424759. Epub 2004 Aug 20.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验