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粪产碱杆菌亚种粪产碱杆菌 NCIB 8687(CCUG 2071)的基因组草案序列。

Draft genome sequence of Alcaligenes faecalis subsp. faecalis NCIB 8687 (CCUG 2071).

机构信息

Department of Microbiology and Immunology, University of Illinois, Chicago, Illinois, USA.

出版信息

J Bacteriol. 2012 Sep;194(18):5153. doi: 10.1128/JB.01185-12.

DOI:10.1128/JB.01185-12
PMID:22933773
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3430353/
Abstract

Alcaligenes faecalis subsp. faecalis NCIB 8687, the betaproteobacterium from which arsenite oxidase had its structure solved and the first "arsenate gene island" identified, provided a draft genome of 3.9 Mb in 186 contigs (with the largest 15 comprising 90% of the total) for this opportunistic pathogen species.

摘要

粪产碱杆菌亚种粪产碱杆菌 NCIB 8687,β变形菌,其亚砷酸盐氧化酶的结构已被解析,也是首个“砷酸盐基因岛”被发现的细菌,为这种机会性病原体提供了 3.9Mb 的基因组草图,由 186 个重叠群组成(最大的 15 个重叠群占总基因组的 90%)。

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J Bacteriol. 2012 Jan;194(2):207-8. doi: 10.1128/JB.06391-11. Epub 2011 Nov 4.
2
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic.参与细菌对无机砷进行氧化和还原的基因与酶。
Appl Environ Microbiol. 2005 Feb;71(2):599-608. doi: 10.1128/AEM.71.2.599-608.2005.
4
Bacterial oxidation of arsenite. I. Description of bacteria isolated from arsenical cattle-dipping fluids.亚砷酸盐的细菌氧化。I. 从含砷牛浸液中分离出的细菌的描述。
Aust J Biol Sci. 1954 Nov;7(4):452-78. doi: 10.1071/bi9540452.
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The purification and characterization of arsenite oxidase from Alcaligenes faecalis, a molybdenum-containing hydroxylase.粪产碱杆菌中含钼羟化酶——亚砷酸氧化酶的纯化及特性研究
J Biol Chem. 1992 Nov 25;267(33):23674-82.