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铜绿假单胞菌的喹诺酮信号(PQS)响应群体感应转录因子PqsR(MvfR)配体结合结构域的结晶及初步晶体结构分析

Crystallization and preliminary crystal structure analysis of the ligand-binding domain of PqsR (MvfR), the Pseudomonas quinolone signal (PQS) responsive quorum-sensing transcription factor of Pseudomonas aeruginosa.

作者信息

Xu Ningna, Yu Shen, Moniot Sébastien, Weyand Michael, Blankenfeldt Wulf

机构信息

Lehrstuhl für Biochemie, Universität Bayreuth, Universitätsstrasse 30, 95447 Bayreuth, Germany.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1034-9. doi: 10.1107/S1744309112032538. Epub 2012 Aug 30.

DOI:10.1107/S1744309112032538
PMID:22949189
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3433192/
Abstract

The opportunistic bacterial pathogen Pseudomonas aeruginosa employs three transcriptional regulators, LasR, RhlR and PqsR, to control the transcription of a large subset of its genes in a cell-density-dependent process known as quorum sensing. Here, the recombinant production, crystallization and structure solution of the ligand-binding domain of PqsR (MvfR), the LysR-type transcription factor that responds to the Pseudomonas quinolone signal (PQS), a quinolone-based quorum-sensing signal that is unique to P. aeruginosa and possibly a small number of other bacteria, is reported. PqsR regulates the expression of many virulence genes and may therefore be an interesting drug target. The ligand-binding domain (residues 91-319) was produced as a fusion with SUMO, and hexagonal-shaped crystals of purified PqsR_91-319 were obtained using the vapour-diffusion method. Crystallization in the presence of a PQS precursor allowed data collection to 3.25 Å resolution on a synchrotron beamline, and initial phases have been obtained using single-wavelength anomalous diffraction data from seleno-L-methionine-labelled crystals, revealing the space group to be P6(5)22, with unit-cell parameters a = b = 116-120, c = 115-117 Å.

摘要

机会性细菌病原体铜绿假单胞菌利用三种转录调节因子LasR、RhlR和PqsR,在一种称为群体感应的细胞密度依赖性过程中控制其大量基因子集的转录。本文报道了PqsR(MvfR)配体结合结构域的重组表达、结晶及结构解析,PqsR是一种LysR型转录因子,可响应铜绿假单胞菌喹诺酮信号(PQS),这是一种基于喹诺酮的群体感应信号,为铜绿假单胞菌及可能少数其他细菌所特有。PqsR调节许多毒力基因的表达,因此可能是一个有吸引力的药物靶点。配体结合结构域(第91至319位氨基酸残基)作为与SUMO的融合蛋白表达,采用气相扩散法获得了纯化的PqsR_91-319的六边形晶体。在PQS前体存在下进行结晶,使得在同步加速器光束线上能够收集到分辨率为3.25 Å的数据,并利用硒代-L-甲硫氨酸标记晶体的单波长反常衍射数据获得了初始相位,结果表明空间群为P6(5)22,晶胞参数a = b = 116 - 120,c = 115 - 117 Å。

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本文引用的文献

1
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Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jun 1;68(Pt 6):695-7. doi: 10.1107/S1744309112016661. Epub 2012 May 23.
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Facilities for macromolecular crystallography at the Helmholtz-Zentrum Berlin.柏林亥姆霍兹研究中心的大分子晶体学设施。
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Discovery of antagonists of PqsR, a key player in 2-alkyl-4-quinolone-dependent quorum sensing in Pseudomonas aeruginosa.铜绿假单胞菌中2-烷基-4-喹诺酮依赖性群体感应关键参与者PqsR拮抗剂的发现。
Chem Biol. 2012 Mar 23;19(3):381-90. doi: 10.1016/j.chembiol.2012.01.015.
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A quorum sensing regulated small volatile molecule reduces acute virulence and promotes chronic infection phenotypes.群体感应调控的小挥发性分子降低急性毒力并促进慢性感染表型。
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Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes.假单胞菌基因组数据库:改进了假单胞菌基因组的比较分析和群体基因组学能力。
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Transcriptomic analysis reveals a global alkyl-quinolone-independent regulatory role for PqsE in facilitating the environmental adaptation of Pseudomonas aeruginosa to plant and animal hosts.转录组分析揭示了 PqsE 在促进铜绿假单胞菌适应植物和动物宿主方面的全局烷基-喹诺酮独立调控作用。
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