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乙型肝炎病毒DNA的锁核酸实时荧光定量PCR探针法检测

LNA real-time PCR probe quantification of hepatitis B virus DNA.

作者信息

Wang Qing, Wang Xueqian, Zhang Junhua, Song Guanghui

机构信息

Department of Clinical Laboratory, The Affiliated Hospital of Qingdao University Medical College;

出版信息

Exp Ther Med. 2012 Mar;3(3):503-508. doi: 10.3892/etm.2011.442. Epub 2011 Dec 28.

DOI:10.3892/etm.2011.442
PMID:22969919
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3438541/
Abstract

In the present study, we standardized a TaqMan locked nucleic acid (LNA) real-time polymerase chain reaction (PCR) probe for the accurate quantification and detection of hepatitis B virus (HBV) DNA in serum (plasma), and evaluated its methodology. LNA probe technology had a much better detection performance in HBV DNA than the common TaqMan probe. The assay based on the LNA probe had a wider linear detection range, higher sensitivity, stability and amplification efficiency, and a lower concentration of probes than the TaqMan probe. Among the 15 cases with chronic hepatitis B surface antigen (HBsAg) (+) alone, only 4 cases that were detected by TaqMan real-time PCR were negative; however, the same samples were positive by LNA real-time PCR (p<0.05). A positive correlation between viral load measurements for the 35 samples with HBV-positive DNA was detected in both LNA and TaqMan real-time PCR.

摘要

在本研究中,我们标准化了一种TaqMan锁核酸(LNA)实时聚合酶链反应(PCR)探针,用于准确定量和检测血清(血浆)中的乙型肝炎病毒(HBV)DNA,并评估了其方法学。LNA探针技术在HBV DNA检测方面比普通TaqMan探针具有更好的检测性能。基于LNA探针的检测方法具有更宽的线性检测范围、更高的灵敏度、稳定性和扩增效率,且探针浓度低于TaqMan探针。在仅慢性乙型肝炎表面抗原(HBsAg)(+)的15例病例中,仅4例通过TaqMan实时PCR检测为阴性;然而,相同样本通过LNA实时PCR检测为阳性(p<0.05)。在LNA和TaqMan实时PCR中均检测到35例HBV DNA阳性样本的病毒载量测量值之间存在正相关。

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本文引用的文献

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Comparison of nine different real-time PCR chemistries for qualitative and quantitative applications in GMO detection.九种不同实时 PCR 化学试剂在转基因生物检测中的定性和定量应用比较。
Anal Bioanal Chem. 2010 Mar;396(6):2023-9. doi: 10.1007/s00216-009-3418-0. Epub 2010 Jan 20.
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Diagnostic PCR: comparative sensitivity of four probe chemistries.诊断性聚合酶链反应:四种探针化学方法的比较敏感性
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Quantification of mRNA using real-time RT-PCR.使用实时逆转录聚合酶链反应对信使核糖核酸进行定量分析。
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Evaluation of the COBAS AmpliPrep-total nucleic acid isolation-COBAS TaqMan hepatitis B virus (HBV) quantitative test and comparison to the VERSANT HBV DNA 3.0 assay.COBAS AmpliPrep全核酸提取-COBAS TaqMan乙型肝炎病毒(HBV)定量检测的评估及与VERSANT HBV DNA 3.0检测法的比较。
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Evaluation of probe chemistries and platforms to improve the detection limit of real-time PCR.评估探针化学和平台以提高实时聚合酶链反应的检测限。
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Assessment of the target-capture PCR hepatitis B virus (HBV) DNA quantitative assay and comparison with commercial HBV DNA quantitative assays.靶向捕获聚合酶链反应检测乙型肝炎病毒(HBV)DNA定量分析及其与商用HBV DNA定量分析的比较。
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Chimeric LNA/DNA probes as a detection system for real-time PCR.嵌合锁核酸/DNA探针作为实时PCR的检测系统
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