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一种实时逆转录聚合酶链反应检测方法的建立,用于从自然感染中全球区分黄热病病毒疫苗相关不良事件。

Development of a Real-Time Reverse Transcription-PCR Assay for Global Differentiation of Yellow Fever Virus Vaccine-Related Adverse Events from Natural Infections.

机构信息

Centers for Disease Control and Prevention, Fort Collins, Colorado, USA

Centers for Disease Control and Prevention, Fort Collins, Colorado, USA.

出版信息

J Clin Microbiol. 2018 May 25;56(6). doi: 10.1128/JCM.00323-18. Print 2018 Jun.

DOI:10.1128/JCM.00323-18
PMID:29643198
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5971556/
Abstract

Yellow fever (YF) is a reemerging public health threat, with frequent outbreaks prompting large vaccination campaigns in regions of endemicity in Africa and South America. Specific detection of vaccine-related adverse events is resource-intensive, time-consuming, and difficult to achieve during an outbreak. To address this, we have developed a highly transferable rapid yellow fever virus (YFV) vaccine-specific real-time reverse transcription-PCR (RT-PCR) assay that distinguishes vaccine from wild-type lineages. The assay utilizes a specific hydrolysis probe that includes locked nucleic acids to enhance specific discrimination of the YFV17D vaccine strain genome. Promisingly, sensitivity and specificity analyses reveal this assay to be highly specific to vaccine strain(s) when tested on clinical samples and YFV cell culture isolates of global origin. Taken together, our data suggest the utility of this assay for use in laboratories of varied capacity for the identification and differentiation of vaccine-related adverse events from wild-type infections of both African and South American origin.

摘要

黄热病(YF)是一种重新出现的公共卫生威胁,在非洲和南美洲的流行地区经常爆发,需要开展大规模疫苗接种活动。针对疫苗相关不良事件的具体检测需要耗费大量资源,既耗时又困难。因此,我们开发了一种高度可转移的快速黄热病病毒(YFV)疫苗特异性实时逆转录聚合酶链反应(RT-PCR)检测方法,可区分疫苗株和野生型病毒株。该检测方法利用一种特异性水解探针,其中包含锁定核酸,以增强对 YFV17D 疫苗株基因组的特异性区分。有希望的是,敏感性和特异性分析表明,当在临床样本和源自全球的 YFV 细胞培养分离物上进行测试时,该检测方法对疫苗株具有高度特异性。总的来说,我们的数据表明,该检测方法可用于不同能力的实验室,用于鉴定和区分源自非洲和南美洲的野生型感染与疫苗相关的不良事件。

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本文引用的文献

1
Lineage-Specific Real-Time RT-PCR for Yellow Fever Virus Outbreak Surveillance, Brazil.巴西用于黄热病病毒疫情监测的谱系特异性实时逆转录聚合酶链反应
Emerg Infect Dis. 2017 Nov;23(11):1867-71. doi: 10.3201/eid2311.171131. Epub 2017 Nov 17.
2
Adverse event reports following yellow fever vaccination, 2007-13.2007-2013 年黄热病疫苗接种后的不良事件报告。
J Travel Med. 2016 Jul 4;23(5). doi: 10.1093/jtm/taw045. Print 2016 May.
3
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
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Locked Nucleic Acid Probe-Based Real-Time PCR Assay for the Rapid Detection of Rifampin-Resistant Mycobacterium tuberculosis.基于锁核酸探针的实时PCR检测法快速检测耐利福平结核分枝杆菌
PLoS One. 2015 Nov 24;10(11):e0143444. doi: 10.1371/journal.pone.0143444. eCollection 2015.
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Serious adverse events associated with yellow fever vaccine.与黄热病疫苗相关的严重不良事件。
Hum Vaccin Immunother. 2015;11(9):2183-7. doi: 10.1080/21645515.2015.1022700.
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Yellow fever.黄热病
J Clin Virol. 2015 Mar;64:160-73. doi: 10.1016/j.jcv.2014.08.030. Epub 2014 Oct 24.
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