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发光杆菌亚种诺伊氏亚种,一种与新型异小杆线虫相关的共生细菌,该线虫与印度异小杆线虫有关。

Photorhabdus luminescens subsp. noenieputensis subsp. nov., a symbiotic bacterium associated with a novel Heterorhabditis species related to Heterorhabditis indica.

机构信息

Department of Conservation Ecology and Entomology, Stellenbosch University, Private Bag X1, 7602 Matieland, South Africa.

Department of Microbiology, Stellenbosch University, Private Bag X1, 7602 Matieland, Stellenbosch, South Africa.

出版信息

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1853-1858. doi: 10.1099/ijs.0.044388-0. Epub 2012 Sep 14.

Abstract

The bacterial symbiont AM7(T), isolated from a novel entomopathogenic nematode species of the genus Heterorhabditis, displays the main phenotypic traits of the genus Photorhabdus and is highly pathogenic to Galleria mellonella. Phylogenetic analysis based on a multigene approach (16S rRNA, recA, gyrB, dnaN, gltX and infB) confirmed the classification of isolate AM7(T) within the species Photorhabdus luminescens and revealed its close relatedness to Photorhabdus luminescens subsp. caribbeanensis, P. luminescens subsp. akhurstii and P. luminescens subsp. hainanensis. The five concatenated protein-encoding sequences (4197 nt) of strain AM7(T) revealed 95.8, 95.4 and 94.9 % nucleotide identity to sequences of P. luminescens subsp. caribbeanensis HG29(T), P. luminescens subsp. akhurstii FRG04(T) and P. luminescens subsp. hainanensis C8404(T), respectively. These identity values are less than the threshold of 97 % proposed for classification within one of the existing subspecies of P. luminescens. Unlike other strains described for P. luminescens, strain AM7(T) produces acid from adonitol, sorbitol and xylitol, assimilates xylitol and has no lipase activity on medium containing Tween 20 or 60. Strain AM7(T) is differentiated from P. luminescens subsp. caribbeanensis by the assimilation of N-acetylglucosamine and the absence of haemolytic activity. Unlike P. luminescens subsp. akhurstii, strain AM7(T) does not assimilate mannitol, and it is distinguished from P. luminescens subsp. hainanensis by the assimilation of trehalose and citrate, the inability to produce indole from tryptophan and the presence of acetoin production and urease activity. Strain AM7(T) ( = ATCC BAA-2407(T)  = DSM 25462(T)) belongs to a novel subspecies, and is proposed as the type strain of Photorhabdus luminescens subsp. noenieputensis sp. nov.

摘要

从一种新型的昆虫病原线虫属异小杆线虫中分离到的细菌共生体 AM7(T),表现出 Photorhabdus 属的主要表型特征,对大蜡螟具有高度致病性。基于多基因方法(16S rRNA、recA、gyrB、dnaN、gltX 和 infB)的系统发育分析证实了分离株 AM7(T)在 Photorhabdus luminescens 种内的分类,并揭示了其与 Photorhabdus luminescens subsp. caribbeanensis、P. luminescens subsp. akhurstii 和 P. luminescens subsp. hainanensis 的密切关系。菌株 AM7(T) 的五个串联蛋白编码序列(4197nt)与 Photorhabdus luminescens subsp. caribbeanensis HG29(T)、P. luminescens subsp. akhurstii FRG04(T) 和 P. luminescens subsp. hainanensis C8404(T) 的序列分别具有 95.8%、95.4%和 94.9%的核苷酸同一性。这些同一性值小于 97%的阈值,这一阈值被提议用于 Photorhabdus luminescens 现有亚种之一的分类。与描述的其他 Photorhabdus luminescens 菌株不同,菌株 AM7(T) 可从 adonitol、sorbitol 和 xylitol 中产生酸,可同化 xylitol,并且在含有 Tween 20 或 60 的培养基上没有脂肪酶活性。菌株 AM7(T) 通过同化 N-乙酰葡萄糖胺和缺乏溶血活性与 Photorhabdus luminescens subsp. caribbeanensis 区分开来。与 Photorhabdus luminescens subsp. akhurstii 不同,菌株 AM7(T) 不能同化甘露醇,并且通过同化 trehalose 和柠檬酸、不能从色氨酸中产生吲哚以及存在乙酰丁酮生产和脲酶活性与 Photorhabdus luminescens subsp. hainanensis 区分开来。菌株 AM7(T)( = ATCC BAA-2407(T)  = DSM 25462(T))属于一个新的亚种,被提议作为 Photorhabdus luminescens subsp. noenieputensis sp. nov. 的模式菌株。

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