Glaeser Stefanie P, Tobias Nicholas J, Thanwisai Aunchalee, Chantratita Narisara, Bode Helge B, Kämpfer Peter
Institut für Angewandte Mikrobiologie, Universität Giessen, Giessen, Germany.
Fachbereich Biowissenschaften, Merck Stiftungsprofessur für Molekulare Biotechnologie, Goethe-Universität Frankfurt, Frankfurt am Main, Germany.
Int J Syst Evol Microbiol. 2017 Apr;67(4):1046-1051. doi: 10.1099/ijsem.0.001761. Epub 2017 May 5.
A lightly yellowish-pigmented, oxidase-negative bacterial strain (PB45.5T) isolated from the Nam Nao district of Phetchabun in central Thailand was investigated to determine its taxonomic position. Cells of the isolate showed a rod shaped appearance. The strain stained Gram-negative. Strain PB45.5T shared highest 16S rRNA gene sequence similarity with the type strains of Photorhabdus luminescens subsp. akhurstii (99.2 %) and Photorhabdus luminescens subsp. hainanensis (99.1 %) and lower similarities to all other Photorhabdus luminescens subspecies (<98.0 %). Multilocus sequence analysis (MLSA) based on concatenated partial recA, dnaN, gltX, gyrB and infB gene sequences confirmed the affiliation obtained by 16S rRNA gene sequence analysis but showed a clear distinction of PB45.5T from the closest related type strains. Strain PB45.5T shared only 96.9 % sequence similarity (concatenated nucleotide sequences) with P. luminescens subsp. akhurstii FRG04T and 96.8 % with P. luminescens subsp. hainanensis C8404T. The fatty acid profile of the strain consisted of the major fatty acids C14 : 0, C16 : 0, C17 : 0 cyclo, C16 : 1ω7c and/or iso-C15 : 0 2-OH, and C18 : 1ω7c. The MLSA results and the differential biochemical and chemotaxonomic properties showed that strain PB45.5T represents a novel P. luminescens subspecies, for which the name Photorhabdus luminescens subsp. namnaonensis subsp. nov. (type strain PB45.5T=LMG 29915T=CCM 8729T) is proposed.
对从泰国中部彭世洛府南脑地区分离出的一株淡黄色色素沉着、氧化酶阴性的细菌菌株(PB45.5T)进行了研究,以确定其分类地位。该分离株的细胞呈杆状。该菌株革兰氏染色阴性。菌株PB45.5T与发光光杆菌亚种阿氏光杆菌(99.2%)和发光光杆菌亚种海南光杆菌(99.1%)的模式菌株具有最高的16S rRNA基因序列相似性,与所有其他发光光杆菌亚种的相似性较低(<98.0%)。基于recA、dnaN、gltX、gyrB和infB基因部分串联序列的多位点序列分析(MLSA)证实了16S rRNA基因序列分析所得的亲缘关系,但表明PB45.5T与最密切相关的模式菌株有明显区别。菌株PB45.5T与阿氏光杆菌FRG04T的序列相似性(串联核苷酸序列)仅为96.9%,与海南光杆菌C8404T的序列相似性为96.8%。该菌株的脂肪酸谱由主要脂肪酸C14 : 0、C16 : 0、C17 : 0环丙烷、C16 : 1ω7c和/或异-C15 : 0 2-OH以及C18 : 1ω7c组成。MLSA结果以及不同的生化和化学分类学特性表明,菌株PB45.5T代表一个新的发光光杆菌亚种,为此提出名称发光光杆菌南脑亚种(Photorhabdus luminescens subsp. namnaonensis subsp. nov.)(模式菌株PB45.5T = LMG 29915T = CCM 8729T)。