Alberghina Lilia, Gaglio Daniela, Gelfi Cecilia, Moresco Rosa M, Mauri Giancarlo, Bertolazzi Paola, Messa Cristina, Gilardi Maria C, Chiaradonna Ferdinando, Vanoni Marco
SysBio Centre for Systems Biology Milano and Rome, Italy ; Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza Milano, Italy.
Front Physiol. 2012 Sep 12;3:362. doi: 10.3389/fphys.2012.00362. eCollection 2012.
Systems Biology holds that complex cellular functions are generated as system-level properties endowed with robustness, each involving large networks of molecular determinants, generally identified by "omics" analyses. In this paper we describe four basic cancer cell properties that can easily be investigated in vitro: enhanced proliferation, evasion from apoptosis, genomic instability, and inability to undergo oncogene-induced senescence. Focusing our analysis on a K-ras dependent transformation system, we show that enhanced proliferation and evasion from apoptosis are closely linked, and present findings that indicate how a large metabolic remodeling sustains the enhanced growth ability. Network analysis of transcriptional profiling gives the first indication on this remodeling, further supported by biochemical investigations and metabolic flux analysis (MFA). Enhanced glycolysis, down-regulation of TCA cycle, decoupling of glucose and glutamine utilization, with increased reductive carboxylation of glutamine, so to yield a sustained production of growth building blocks and glutathione, are the hallmarks of enhanced proliferation. Low glucose availability specifically induces cell death in K-ras transformed cells, while PKA activation reverts this effect, possibly through at least two mitochondrial targets. The central role of mitochondria in determining the two investigated cancer cell properties is finally discussed. Taken together the findings reported herein indicate that a system-level property is sustained by a cascade of interconnected biochemical pathways that behave differently in normal and in transformed cells.
系统生物学认为,复杂的细胞功能是作为具有稳健性的系统级特性产生的,每个特性都涉及由分子决定因素构成的大型网络,这些网络通常通过“组学”分析来识别。在本文中,我们描述了四种可在体外轻松研究的癌细胞基本特性:增殖增强、逃避凋亡、基因组不稳定以及无法经历癌基因诱导的衰老。我们将分析重点放在一个依赖K-ras的转化系统上,结果表明增殖增强和逃避凋亡密切相关,并呈现出一些发现,这些发现表明大规模的代谢重塑如何维持增强的生长能力。转录谱的网络分析首次揭示了这种重塑,生化研究和代谢通量分析(MFA)进一步支持了这一结果。糖酵解增强、三羧酸循环下调、葡萄糖和谷氨酰胺利用解偶联,同时谷氨酰胺的还原羧化增加,从而持续产生生长构建块和谷胱甘肽,是增殖增强的标志。低葡萄糖可用性特异性地诱导K-ras转化细胞死亡,而PKA激活可逆转这种效应,这可能至少通过两个线粒体靶点实现。最后讨论了线粒体在决定所研究的两种癌细胞特性中的核心作用。本文报道的研究结果表明,一种系统级特性由一系列相互关联的生化途径维持,这些途径在正常细胞和转化细胞中的行为有所不同。