Chemical Physics Department, Weizmann Institute of Science, 76100 Rehovoth, Israel.
J Phys Chem B. 2012 Nov 1;116(43):12966-71. doi: 10.1021/jp307556j. Epub 2012 Oct 11.
Experiments in recent years have shown that there is a large kinetic isotope effect in the rate of transfer of hydrogen or deuterium in enzymatic reactions of soybean lipoxygenase-1. The kinetic isotope effect (KIE) is only weakly temperature dependent but varies significantly in the presence of mutants whose functional groups are located rather far from the reaction center. In this paper we suggest that variational transition state theory as applied to dissipative systems, above the crossover temperature between deep tunneling and thermal activation, may be used as a paradigm for understanding the dynamics of these reactions. We find that the theory fits the experimental data rather well. The effects of different mutants are readily interpreted in terms of the friction they exert on the reaction center. Increasing the distal functional group increases the friction and thus lowers the kinetic isotope effect.
近年来的实验表明,大豆脂氧合酶-1 的酶促反应中氢或氘转移的速率存在较大的动力学同位素效应。动力学同位素效应(KIE)仅对温度有微弱的依赖性,但在功能基团离反应中心相当远的突变体存在的情况下会发生显著变化。在本文中,我们提出,应用于耗散系统的变分过渡态理论,在深隧穿和热激活之间的交叉温度以上,可用于理解这些反应的动力学。我们发现该理论与实验数据非常吻合。不同突变体的影响可以根据它们对反应中心施加的摩擦力来很容易地解释。增加远端功能基团会增加摩擦力,从而降低动力学同位素效应。