Department of Chemistry, Norwegian University of Science and Technology, Trondheim, Norway.
Biophys J. 2012 Sep 19;103(6):1218-26. doi: 10.1016/j.bpj.2012.07.057.
Experimental studies have shown that the activity of the reconstituted molecular pump Ca(2+)-ATPase strongly depends on the thickness of the supporting bilayer. It is thus expected that the bilayer structure will have an impact on the thermodynamic efficiency of this nanomachine. Here, we introduce a nonequilibrium-thermodynamics theoretical approach to estimate the thermodynamic efficiency of the Ca(2+)-ATPase from analysis of available experimental data about ATP hydrolysis and Ca(2+) transport. We find that the entropy production, i.e., the heat released to the surroundings under working conditions, is approximately constant for bilayers containing phospholipids with hydrocarbon chains of 18-22 carbon atoms. Our estimates for the heat released during the pump operation agree with results obtained from separate calorimetric experiments on the Ca(2+)-ATPase derived from sarcoplasmic reticulum. We show that the thermodynamic efficiency of the reconstituted Ca(2+)-ATPase reaches a maximum for bilayer thicknesses corresponding to maximum activity. Surprisingly, the estimated thermodynamic efficiency is very low, ∼12%. We discuss the significance of this result as representative of the efficiency of other nanomachines, and we address the influence of the experimental set-up on such a low efficiency. Overall, our approach provides a general route to estimate thermodynamic efficiencies and heat dissipation in experimental studies of nanomachines.
实验研究表明,重组分子泵 Ca(2+)-ATP 酶的活性强烈依赖于支撑双层的厚度。因此,预计双层结构将对这种纳米机器的热力学效率产生影响。在这里,我们引入了一种非平衡热力学理论方法,通过分析有关 ATP 水解和 Ca(2+) 运输的可用实验数据来估计 Ca(2+)-ATP 酶的热力学效率。我们发现,对于含有 18-22 个碳原子的烃链的磷脂双层,熵产生,即工作条件下释放到周围环境的热量,大致恒定。我们对泵运行过程中释放的热量的估计与从肌浆网中衍生出的 Ca(2+)-ATP 酶的单独量热实验结果一致。我们表明,对于与最大活性相对应的双层厚度,重组 Ca(2+)-ATP 酶的热力学效率达到最大值。令人惊讶的是,估计的热力学效率非常低,约为 12%。我们讨论了这一结果作为其他纳米机器效率的代表性意义,并讨论了实验设置对如此低效率的影响。总体而言,我们的方法为估计纳米机器实验中的热力学效率和耗散热量提供了一种通用途径。