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远距离转录激活:增强子作用的机制。

Distant activation of transcription: mechanisms of enhancer action.

机构信息

Department of Pharmacology, UMDNJ-Robert Wood Johnson Medical School, Piscataway, New Jersey, USA.

出版信息

Mol Cell Biol. 2012 Dec;32(24):4892-7. doi: 10.1128/MCB.01127-12. Epub 2012 Oct 8.

DOI:10.1128/MCB.01127-12
PMID:23045397
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3510544/
Abstract

Enhancers are regulatory DNA sequences that activate transcription over long distances. Recent studies revealed a widespread role of distant activation in eukaryotic gene regulation and in development of various human diseases, including cancer. Genomic and gene-targeted studies of enhancer action revealed novel mechanisms of transcriptional activation over a distance. They include formation of stable, inactive DNA-protein complexes at the enhancer and target promoter before activation, facilitated distant communication by looping of the spacer chromatin-covered DNA, and promoter activation by mechanisms that are different from classic recruiting. These studies suggest the similarity between the looping mechanisms involved in enhancer action on DNA in bacteria and in chromatin of higher organisms.

摘要

增强子是一种调节 DNA 序列,可以远距离激活转录。最近的研究揭示了远距离激活在真核生物基因调控和各种人类疾病(包括癌症)发展中的广泛作用。对增强子作用的基因组和基因靶向研究揭示了远距离转录激活的新机制。它们包括在激活前在增强子和靶启动子处形成稳定的、无活性的 DNA-蛋白质复合物,通过间隔染色质覆盖的 DNA 的环化促进远距离通信,以及通过不同于经典招募的机制激活启动子。这些研究表明,细菌中 DNA 上增强子作用涉及的环化机制与高等生物染色质中的环化机制相似。

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Distant activation of transcription: mechanisms of enhancer action.远距离转录激活:增强子作用的机制。
Mol Cell Biol. 2012 Dec;32(24):4892-7. doi: 10.1128/MCB.01127-12. Epub 2012 Oct 8.
2
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本文引用的文献

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The long-range interaction landscape of gene promoters.基因启动子的远程相互作用景观。
Nature. 2012 Sep 6;489(7414):109-13. doi: 10.1038/nature11279.
2
Characterization of enhancer function from genome-wide analyses.从全基因组分析中鉴定增强子功能。
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The transcriptional and epigenomic foundations of ground state pluripotency.胚胎干细胞多能性的转录和表观遗传基础。
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Internucleosomal interactions mediated by histone tails allow distant communication in chromatin.组蛋白尾部介导的核小体间相互作用允许染色质中的远程通讯。
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Genome-wide phosphoacetylation of histone H3 at Drosophila enhancers and promoters.果蝇增强子和启动子上组蛋白 H3 的全基因组磷酸乙酰化。
Genome Res. 2012 Jun;22(6):1081-8. doi: 10.1101/gr.136929.111. Epub 2012 Apr 16.
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Epigenomic enhancer profiling defines a signature of colon cancer.表观基因组增强子特征分析定义了结肠癌的特征。
Science. 2012 May 11;336(6082):736-9. doi: 10.1126/science.1217277. Epub 2012 Apr 12.
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The ancient and evolving roles of cohesin in gene expression and DNA repair.黏连蛋白在基因表达和 DNA 修复中的古老而演变的角色。
Curr Biol. 2012 Apr 10;22(7):R240-50. doi: 10.1016/j.cub.2012.02.046.
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Genome architecture and expression.基因组结构与表达
Curr Opin Genet Dev. 2012 Apr;22(2):59-61. doi: 10.1016/j.gde.2012.03.003. Epub 2012 Apr 6.
10
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.广泛的启动子为中心的染色质相互作用为转录调控提供了拓扑基础。
Cell. 2012 Jan 20;148(1-2):84-98. doi: 10.1016/j.cell.2011.12.014.