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碱金属阳离子与组氨酸相互作用的热化学:侧链的影响。

Thermochemistry of alkali metal cation interactions with histidine: influence of the side chain.

机构信息

Department of Chemistry, University of Utah, Salt Lake City, 84112, United States.

出版信息

J Phys Chem A. 2012 Dec 6;116(48):11823-32. doi: 10.1021/jp310179c. Epub 2012 Nov 26.

Abstract

The interactions of alkali metal cations (M(+) = Na(+), K(+), Rb(+), Cs(+)) with the amino acid histidine (His) are examined in detail. Experimentally, bond energies are determined using threshold collision-induced dissociation of the M(+)(His) complexes with xenon in a guided ion beam tandem mass spectrometer. Analyses of the energy dependent cross sections provide 0 K bond energies of 2.31 ± 0.11, 1.70 ± 0.08, 1.42 ± 0.06, and 1.22 ± 0.06 eV for complexes of His with Na(+), K(+), Rb(+), and Cs(+), respectively. All bond dissociation energy (BDE) determinations include consideration of unimolecular decay rates, internal energy of reactant ions, and multiple ion-neutral collisions. These experimental results are compared to values obtained from quantum chemical calculations conducted previously at the MP2(full)/6-311+G(2d,2p), B3LYP/6-311+G(2d,2p), and B3P86/6-311+G(2d,2p) levels with geometries and zero point energies calculated at the B3LYP/6-311+G(d,p) level where Rb and Cs use the Hay-Wadt effective core potential and basis set augmented with additional polarization functions (HW*). Additional calculations using the def2-TZVPPD basis set with B3LYP geometries were conducted here at all three levels of theory. Either basis set yields similar results for Na(+)(His) and K(+)(His), which are in reasonable agreement with the experimental BDEs. For Rb(+)(His) and Cs(+)(His), the HW* basis set and ECP underestimate the experimental BDEs, whereas the def2-TZVPPD basis set yields results in good agreement. The effect of the imidazole side chain on the BDEs is examined by comparing the present results with previous thermochemistry for other amino acids. Both polarizability and the local dipole moment of the side chain are influential in the energetics.

摘要

详细考察了碱金属阳离子(M(+) = Na(+)、K(+)、Rb(+)、Cs(+))与氨基酸组氨酸(His)的相互作用。实验上,使用氙气在导向离子束串联质谱仪中碰撞诱导解离 M(+)(His)配合物,确定键能。对能量相关截面的分析提供了 0 K 时与 Na(+)、K(+)、Rb(+)和 Cs(+)形成配合物的 His 的键能分别为 2.31 ± 0.11、1.70 ± 0.08、1.42 ± 0.06 和 1.22 ± 0.06 eV。所有键离解能(BDE)的测定均考虑了单分子衰变率、反应物离子的内部能量和多次离子-中性碰撞。将这些实验结果与先前在 MP2(full)/6-311+G(2d,2p)、B3LYP/6-311+G(2d,2p) 和 B3P86/6-311+G(2d,2p) 水平上进行的量子化学计算结果进行了比较,这些计算的几何形状和零点能是在 B3LYP/6-311+G(d,p) 水平上计算的,其中 Rb 和 Cs 使用 Hay-Wadt 有效核势和基底集,并增加了额外的极化函数(HW*)。在这里,在所有三个理论水平上都使用 def2-TZVPPD 基底集和 B3LYP 几何形状进行了额外的计算。两种基底集对于 Na(+)(His)和 K(+)(His)都得到了相似的结果,与实验 BDE 有较好的一致性。对于 Rb(+)(His)和 Cs(+)(His),HW*基底集和 ECP 低估了实验 BDE,而 def2-TZVPPD 基底集则得到了较好的结果。通过比较其他氨基酸的先前热化学数据,研究了咪唑侧链对 BDE 的影响。侧链的极化率和局部偶极矩对能量学都有影响。

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