Department of Biology and Biochemistry, University of Bath, Bath, UK.
FEBS J. 2013 Jan;280(1):302-18. doi: 10.1111/febs.12071. Epub 2012 Dec 11.
Angiogenin (Ang) is a potent inducer of neovascularization. Point mutations in human Ang have been linked to cancer progression and two neurodegenerative diseases: amyotrophic lateral sclerosis and Parkinson's disease. Intensive structural and functional analyses of Ang have been paramount in assigning functions to this novel homologue of bovine pancreatic RNase A. However, inhibitor-binding studies with crystalline Ang (for designing potential anti-cancer drugs) have been hampered as a result of the inaccessibility of the active site. Experiments with the murine homologues of Ang have not only overcome the obvious practical limitations encountered when studying the role of a human protein in healthy individuals, but also the crystal structures of murine angiogenins (mAng and mAng-4) have revealed themselves to have greater potential for the visualization of small-molecule inhibitor binding at the active site. In the present study, we report the crystal structures of two more murine Ang paralogues, mAng-2 and mAng-3, at 1.6 and 1.8 Å resolution, respectively. These constitute the first crystal structures of an Ang with a zinc ion bound at the active site and provide some insight into the possible mode of inhibition of the ribonucleolytic activity of the enzyme by these divalent cations. Both structures show that the residues forming the putative P(1), B(1) and B(2) subsites occupy positions similar to their counterparts in human Ang and are likely to have conserved roles. However, a less obtrusive conformation of the C-terminal segment in mAng-3 and the presence of a sulfate ion in the B(1) subsite of mAng-2 suggest that these proteins have the potential to be used for inhibitor-binding studies. We also discuss the biological relevance of the structural similarities and differences between the different Ang homologues.
血管生成素 (Ang) 是一种有效的血管新生诱导剂。人类 Ang 的点突变与癌症进展和两种神经退行性疾病有关:肌萎缩侧索硬化症和帕金森病。对 Ang 的深入结构和功能分析对于将这种牛胰腺 RNase A 的新型同源物的功能分配至关重要。然而,由于活性位点不可接近,因此与结晶 Ang(用于设计潜在的抗癌药物)的抑制剂结合研究受到阻碍。用 Ang 的鼠同源物进行的实验不仅克服了在健康个体中研究人类蛋白质作用时遇到的明显实际限制,而且 Ang 的鼠同源物(mAng 和 mAng-4)的晶体结构也揭示了它们在可视化小分子抑制剂与活性位点结合方面具有更大的潜力。在本研究中,我们报告了另外两种鼠 Ang 同源物 mAng-2 和 mAng-3 的晶体结构,分辨率分别为 1.6 和 1.8 Å。这些构成了第一个在活性位点结合锌离子的 Ang 晶体结构,并为这些二价阳离子对酶的核糖核酸酶活性的可能抑制模式提供了一些见解。两个结构都表明,形成假定 P(1)、B(1) 和 B(2)亚基的残基占据与人类 Ang 中对应残基相似的位置,并且可能具有保守的作用。然而,mAng-3 的 C 末端片段的构象不那么突出,并且 mAng-2 的 B(1)亚基中存在硫酸盐离子,这表明这些蛋白质有可能用于抑制剂结合研究。我们还讨论了不同 Ang 同源物之间结构相似性和差异的生物学相关性。