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碳氧肌红蛋白光谱带中的非均匀展宽。光谱与功能异质性之间的联系。

Inhomogeneous broadening in spectral bands of carbonmonoxymyoglobin. The connection between spectral and functional heterogeneity.

作者信息

Ormos P, Ansari A, Braunstein D, Cowen B R, Frauenfelder H, Hong M K, Iben I E, Sauke T B, Steinbach P J, Young R D

机构信息

Department of Physics, University of Illinois, Urbana 61801.

出版信息

Biophys J. 1990 Feb;57(2):191-9. doi: 10.1016/S0006-3495(90)82522-4.

Abstract

The rebinding kinetics of CO to myoglobin after flash photolysis is nonexponential in time below approximately 180 K; the kinetics is governed by a distribution of enthalpic barriers. This distribution results from inhomogeneities in the protein conformation, referred to as conformational substates. Hole-burning experiments on the Soret and IR CO-stretch bands test the assumption that an inhomogeneous distribution of conformational substates results in inhomogeneously broadened spectra. CO was slowly photolyzed at different wavelengths in the Soret band at 10 K. Both the Soret band and the CO-stretch band A1, centered at 1,945 cm-1, shift during photolysis, demonstrating that different wavelengths excite different parts of the distributed population. We have also done kinetic hole-burning experiments by measuring peak shifts in the Soret and A1 bands as the CO molecules rebind. The shifts indicate that the spectral and enthalpic distributions are correlated. In the A1 band, the spectral and enthalpic distributions are highly correlated while in the Soret the correlation is weak. From the peak shifts in the spectral and kinetic hole-burning experiments the inhomogeneous broadening is estimated to be approximately 15% of the total width in the Soret band and approximately 60% in A1. We have previously measured the tilt angle alpha between the bound CO and the heme normal (Ormos, P., D. Braunstein, H. Frauenfelder, M. K. Hong, S.-L. Lin, T. B. Sauke, and R. D. Young. 1988. Proc. Natl. Acad. Sci. USA. 85:8492-8496) and observed a wave number dependence of the tilt angles within the CO-stretch A bands. Thus the spectral and enthalpic distributions of the A bands are coupled to a heterogeneity of the structure.

摘要

在约180 K以下,闪光光解后一氧化碳与肌红蛋白的重新结合动力学在时间上是非指数型的;该动力学受焓垒分布的支配。这种分布源于蛋白质构象的不均匀性,即构象亚态。对Soret带和红外CO伸缩带进行的烧孔实验检验了这样一种假设:构象亚态的不均匀分布会导致光谱的不均匀展宽。在10 K下,一氧化碳在Soret带的不同波长处缓慢光解。在光解过程中,Soret带和位于1945 cm-1处的CO伸缩带A1都会发生位移,这表明不同波长激发了分布群体的不同部分。我们还通过测量CO分子重新结合时Soret带和A1带的峰位移进行了动力学烧孔实验。这些位移表明光谱分布和焓分布是相关的。在A1带中,光谱分布和焓分布高度相关,而在Soret带中相关性较弱。根据光谱和动力学烧孔实验中的峰位移,估计Soret带中不均匀展宽约占总宽度的15%,A1带中约占60%。我们之前测量了结合的CO与血红素法线之间的倾斜角α(奥尔莫斯,P.,D. 布劳恩施泰因,H. 弗劳恩费尔德,M. K. 洪,S.-L. 林,T. B. 索克,和R. D. 杨。1988年。美国国家科学院院刊。85:8492 - 8496),并观察到CO伸缩A带内倾斜角的波数依赖性。因此,A带的光谱分布和焓分布与结构的不均匀性相关联。

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本文引用的文献

1
Glassy behavior of a protein.蛋白质的玻璃态行为。
Phys Rev Lett. 1989 Apr 17;62(16):1916-1919. doi: 10.1103/PhysRevLett.62.1916.
2
Spectral broadening in biomolecules.生物分子中的光谱展宽。
Phys Rev Lett. 1986 Sep 8;57(10):1267-1270. doi: 10.1103/PhysRevLett.57.1267.
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A consistent picture of protein dynamics.蛋白质动力学的一致图景。
Proc Natl Acad Sci U S A. 1984 Nov;81(22):7088-92. doi: 10.1073/pnas.81.22.7088.
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Fluctuations in protein structure from X-ray diffraction.X射线衍射法测定的蛋白质结构波动
Annu Rev Biophys Bioeng. 1984;13:331-71. doi: 10.1146/annurev.bb.13.060184.001555.
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Protein states and proteinquakes.蛋白质状态与蛋白质震颤。
Proc Natl Acad Sci U S A. 1985 Aug;82(15):5000-4. doi: 10.1073/pnas.82.15.5000.
10
Rebinding and relaxation in the myoglobin pocket.肌红蛋白口袋中的再结合与松弛
Biophys Chem. 1987 May 9;26(2-3):337-55. doi: 10.1016/0301-4622(87)80034-0.

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