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通过拉曼活性的铁-氮ε(组氨酸F8)伸缩振动探测脱氧肌红蛋白中Fe(2+)-组氨酸F8连接构象亚态之间的热涨落。

Thermal fluctuations between conformational substates of the Fe(2+)-HisF8 linkage in deoxymyoglobin probed by the Raman active Fe-N epsilon (HisF8) stretching vibration.

作者信息

Gilch H, Dreybrodt W, Schweitzer-Stenner R

机构信息

FB1-Institut für Experimentelle Physik, Universität Bremen, Germany.

出版信息

Biophys J. 1995 Jul;69(1):214-27. doi: 10.1016/S0006-3495(95)79893-9.

DOI:10.1016/S0006-3495(95)79893-9
PMID:7669899
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1236239/
Abstract

We have measured the VFe-His Raman band of horse heart deoxymyoglobin dissolved in an aqueous solution as a function of temperature between 10 and 300 K. The minimal model to which these data can be fitted in a statistically significant and physically meaningful way comprises four different Lorentzian bands with frequencies at 197, 209, 218, and 226 cm-1, and a Gaussian band at 240 cm-1, which exhibit halfwidths between 10 and 12.5 cm-1. All these parameters were assumed to be independent of temperature. The temperature dependence of the apparent total band shape's frequency is attributed to an intensity redistribution of the subbands at omega 1 = 209 cm-1, omega 2 = 218 cm-1, and omega 3 = 226 cm-1, which are assigned to Fe-N epsilon (HisF8) stretching modes in different conformational substrates of the Fe-HisF8 linkage. They comprise different out-of-plane displacements of the heme iron. The two remaining bands at 197 and 240 cm-1 result from porphyrin modes. Their intensity ratio is nearly temperature independent. The intensity ratio I3/I2 of the vFe-His subbands exhibits a van't Hoff behavior between 150 and 300 K, bending over in a region between 150 and 80 K, and remains constant between 80 and 10 K, whereas I2/I1 shows a maximum at 170 K and approaches a constant value at 80 K. These data can be fitted by a modified van't Hoff expression, which accounts for the freezing into a non-equilibrium distribution of substates below a distinct temperature Tf and also for the linear temperature dependence of the specific heat of proteins. The latter leads to a temperature dependence of the entropic and enthalpic differences between conformational substates. The fits to the intensity ratios of the vFe-His subbands yield a freezing temperature of Tf = 117 K and a transition region of delta T = 55 K. In comparison we have utilized the above thermodynamic model to reanalyze earlier data on the temperature dependence of the ratio Ao/A1 of two subbands underlying the infrared absorption band of the CO stretching vibration in CO-ligated myoglobin (A. Ansari, J. Berendzen, D. Braunstein, B. R. Cowen, H. Frauenfelder, M. K. Kong, I. E. T. Iben, J. Johnson, P. Ormos, T. B. Sauke, R. Scholl, A. Schulte, P. J. Steinbach, R. D. Vittitow, and R. D. Young, 1987, Biophys. Chem. 26:237-335). This yields thermodynamic parameters, in particular the freezing temperature (Tf = 231 K) and the width of the transition region (AT =8 K), which are significantly different from the corresponding parameters obtained from the above vFe-His data, but very close to values describing the transition of protein bound water from a liquid into an amorphous state. These findings and earlier reported data on the temperature dependence exhibited by the Soret absorption bands of various deoxy and carbonmonoxymyoglobins led us to the conclusion that the fluctuations between conformational substates of the heme environment in carbonmonoxymyoglobin are strongly coupled to motions within the hydration shell, whereas the thermal motions between the substates of the Fe-HisF8 linkage in deoxymyoglobin proceed on an energy landscape that is mainly determined by the intrinsic properties of the protein. The latter differ from protein fluctuations monitored by Mossbauer experiments ondeoxymyoglobin crystals which exhibit a strong coupling to the protein bound water and most probably reflect a higher tier in the hierarchical arrangement of substates and equilibrium fluctuations.

摘要

我们测量了溶解在水溶液中的马心脱氧肌红蛋白的VFe-His拉曼带随温度在10至300 K之间的变化。能够以具有统计显著性和物理意义的方式拟合这些数据的最小模型包括四个不同的洛伦兹带,频率分别为197、209、218和226 cm-1,以及一个位于240 cm-1的高斯带,其半高宽在10至12.5 cm-1之间。假定所有这些参数均与温度无关。表观总带形频率的温度依赖性归因于ω1 = 209 cm-1、ω2 = 218 cm-1和ω3 = 226 cm-1子带的强度重新分布,这些子带被指定为Fe-HisF8键不同构象底物中的Fe-Nε(HisF8)伸缩模式。它们包括血红素铁不同的面外位移。位于197和240 cm-1的另外两个带是由卟啉模式产生的。它们的强度比几乎与温度无关。vFe-His子带的强度比I3/I2在150至300 K之间表现出范特霍夫行为,在150至80 K之间弯曲,并在80至10 K之间保持恒定,而I2/I1在170 K处出现最大值,并在80 K处接近恒定值。这些数据可以用修正的范特霍夫表达式拟合,该表达式考虑了在低于特定温度Tf时冻结到亚态的非平衡分布中,以及蛋白质比热的线性温度依赖性。后者导致构象亚态之间的熵差和焓差具有温度依赖性。对vFe-His子带强度比的拟合得出冻结温度Tf = 117 K和转变区域宽度ΔT = 55 K。相比之下,我们利用上述热力学模型重新分析了早期关于CO结合肌红蛋白中CO伸缩振动红外吸收带下方两个子带的比率Ao/A1的温度依赖性的数据(A. Ansari、J. Berendzen、D. Braunstein、B. R. Cowen、H. Frauenfelder、M. K. Kong、I. E. T. Iben、J. Johnson、P. Ormos、T. B. Sauke、R. Scholl、A. Schulte、P. J. Steinbach、R. D. Vittitow和R. D. Young,198

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