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人外切5'-核苷酸酶(CD73)开放形式的结晶及初步X射线分析

Crystallization and preliminary X-ray analysis of the open form of human ecto-5'-nucleotidase (CD73).

作者信息

Knapp Karen Maree, Zebisch Matthias, Sträter Norbert

机构信息

Institute of Bioanalytical Chemistry, Center for Biotechnology and Biomedicine, University of Leipzig, Deutscher Platz 5, 04103 Leipzig, Germany.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1545-9. doi: 10.1107/S1744309112045447. Epub 2012 Nov 19.

Abstract

Eukaryotic ecto-5'-nucleotidase (e5NT) catalyses the hydrolysis of extracellular AMP to adenosine and plays a pivotal role in switching on adenosine signalling via the P1 receptors of the purinergic signalling pathway. With such an important regulatory role, e5NT has become an appealing new drug target, with potential applications in the treatment of inflammation, chronic pain, hypoxia and cancer. In order to gain insight into the structure and function of the eukaryotic e5NT enzymes and to assist in structure-based drug design, the crystal structure of human e5NT has been solved. Recombinant human e5NT comprising four asparagine-to-aspartate surface mutations targeting potential glycosylation sites was refolded from bacterial inclusion bodies. Refolded and purified human e5NT crystallized in space group P4(3)32 and a data set to 1.85 Å resolution was obtained. The structure could be solved by molecular replacement using a polyalanine model generated from Thermus thermophilus 5'-nucleotidase (5NT). An anomalous data set revealed the presence of a metal-ion binding site, as well as calcium and chloride ion-binding sites. Structural comparisons with bacterial 5NT homologues showed that the human e5NT crystal structure has an open conformation in which the metal- and substrate-binding sites are distant from each other. Here, the crystallization and preliminary X-ray crystallographic analysis of an open structural conformation of human e5NT are described.

摘要

真核外切5'-核苷酸酶(e5NT)催化细胞外AMP水解生成腺苷,并在通过嘌呤能信号通路的P1受体开启腺苷信号传导过程中发挥关键作用。鉴于其如此重要的调节作用,e5NT已成为一个有吸引力的新药物靶点,在炎症、慢性疼痛、缺氧和癌症治疗方面具有潜在应用价值。为深入了解真核e5NT酶的结构与功能,并辅助基于结构的药物设计,已解析出人类e5NT的晶体结构。包含针对潜在糖基化位点的四个天冬酰胺到天冬氨酸表面突变的重组人类e5NT从细菌包涵体中重折叠得到。重折叠并纯化后的人类e5NT在空间群P4(3)32中结晶,并获得了分辨率为1.85 Å的数据集。该结构可通过分子置换法,使用由嗜热栖热菌5'-核苷酸酶(5NT)生成的聚丙氨酸模型来解析。一个反常数据集揭示了一个金属离子结合位点以及钙和氯离子结合位点的存在。与细菌5NT同源物的结构比较表明,人类e5NT晶体结构具有开放构象,其中金属结合位点和底物结合位点彼此相距较远。在此,描述了人类e5NT开放结构构象的结晶及初步X射线晶体学分析。

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