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巴西绵羊和山羊传染性脓疱病毒 B2L 基因的部分序列分析。

Partial sequence analysis of B2L gene of Brazilian orf viruses from sheep and goats.

机构信息

Setor de Virologia, Departamento de Medicina Veterinária Preventiva, Universidade Federal de Santa Maria, Av. Roraima, 1000 Santa Maria, RS 97105-900, Brazil.

出版信息

Vet Microbiol. 2013 Feb 22;162(1):245-53. doi: 10.1016/j.vetmic.2012.10.031. Epub 2012 Nov 8.

Abstract

We herein describe the partial nucleotide sequencing and phylogenetic analysis of the B2L gene of seventeen Brazilian orf viruses (ORFV). Seventeen viruses were recovered from outbreaks of contagious ecthyma in sheep and goats in four states in Southern and Northeast country, and three from commercial vaccines. Most analyzed viruses were associated with outbreaks of classical contagious ecthyma, with lip, nostrils and labial commissure involvement, yet udder/teat, feet, vulvar and disseminated lesions were also reported in some cases. Nucleotide sequence analysis revealed a high degree of B2L similarity among sheep sequences (>99%) regardless the geographic origin, and a remarkable high identity for the two goat isolates (>99.8%), with similarity dropping to below 99% when comparing viruses from the two species. A phylogenetic tree grouped most sheep and goat viruses on different branches. In addition, sequence alignment allowed the identification of up to six scattered nucleotide changes that were predominant and more consistent in goat isolates, including a number of sequences from other continents. Thus, in spite of the high nucleotide similarity, different degrees of similarity and discrete nucleotide changes in the B2L gene may help in grouping ORFV viruses according to host species.

摘要

我们在此描述了 17 株巴西传染性脓疱病毒(ORFV)B2L 基因的部分核苷酸序列和系统进化分析。从南部和东北部四个州的绵羊和山羊传染性脓疱病暴发中分离出 17 株病毒,还有 3 株来自商业疫苗。大多数分析的病毒与经典传染性脓疱病有关,涉及唇、鼻孔和唇间联合,但在一些病例中也报告了乳房/乳头、脚、外阴和扩散性病变。核苷酸序列分析显示,绵羊序列之间的 B2L 相似性很高(>99%),无论地理来源如何,并且两个山羊分离株的相似性非常高(>99.8%),当比较来自两个物种的病毒时,相似性降至 99%以下。系统进化树将大多数绵羊和山羊病毒分为不同的分支。此外,序列比对允许鉴定多达六个分散的核苷酸变化,这些变化在山羊分离株中更为主要和一致,包括来自其他大陆的一些序列。因此,尽管核苷酸相似性很高,但 B2L 基因中的相似性程度和离散核苷酸变化可能有助于根据宿主物种对 ORFV 病毒进行分组。

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