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评估口疮病毒(痘病毒科)的生态位:从无生态位区分广泛生态位的挑战。

An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches.

机构信息

Biodiversity Institute, University of Kansas, Lawrence, Kansas, United States of America.

Poxvirus and Rabies Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.

出版信息

PLoS One. 2024 Jan 18;19(1):e0293312. doi: 10.1371/journal.pone.0293312. eCollection 2024.

Abstract

Contagious ecthyma is a skin disease, caused by Orf virus, creating great economic threats to livestock farming worldwide. Zoonotic potential of this disease has gained recent attention owing to the re-emergence of disease in several parts of the world. Increased public health concern emphasizes the need for a predictive understanding of the geographic distributional potential of Orf virus. Here, we mapped the current distribution using occurrence records, and estimated the ecological niche in both geographical and environmental spaces. Twenty modeling experiments, resulting from two- and three-partition models, were performed to choose the candidate models that best represent the geographic distributional potential of Orf virus. For all of our models, it was possible to reject the null hypothesis of predictive performance no better than random expectations. However, statistical significance must be accompanied by sufficiently good predictive performance if a model is to be useful. In our case, omission of known distribution of the virus was noticed in all Maxent models, indicating inferior quality of our models. This conclusion was further confirmed by the independent final evaluation, using occurrence records sourced from the Centre for Agriculture and Bioscience International. Minimum volume ellipsoid (MVE) models indicated the broad range of environmental conditions under which Orf virus infections are found. The excluded climatic conditions from MVEs could not be considered as unsuitable owing to the broad distribution of Orf virus. These results suggest two possibilities: that the niche models fail to identify niche limits that constrain the virus, or that the virus has no detectable niche, as it can be found throughout the geographic distributions of its hosts. This potential limitation of component-based pathogen-only ENMs is discussed in detail.

摘要

传染性脓疱性皮炎是一种由口疮病毒引起的皮肤病,对全球畜牧业造成了巨大的经济威胁。由于该疾病在世界多个地区再次出现,其人畜共患的潜力引起了人们的关注。日益增长的公众健康关注强调了需要预测理解口疮病毒的地理分布潜力。在这里,我们使用现有的记录来绘制其当前的分布,并在地理和环境空间中估计其生态位。进行了二十项建模实验,这些实验是由两部分和三部分模型产生的,以选择最能代表口疮病毒地理分布潜力的候选模型。对于我们的所有模型,都有可能拒绝预测性能不比随机预期更好的零假设。然而,如果模型要有用,那么统计意义必须伴随着足够好的预测性能。在我们的案例中,在所有最大熵模型中都注意到了病毒已知分布的遗漏,这表明我们的模型质量较差。使用来自国际农业和生物科学中心的现有记录进行的独立最终评估进一步证实了这一结论。最小体积椭圆体(MVE)模型表明了在感染口疮病毒的情况下存在广泛的环境条件范围。从 MVEs 中排除的气候条件不能被认为是不合适的,因为口疮病毒分布广泛。这些结果表明了两种可能性:即生态位模型未能确定限制病毒的生态位限制,或者病毒没有可检测到的生态位,因为它可以在其宿主的地理分布范围内找到。详细讨论了基于组件的仅病原体生态位模型的这种潜在局限性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb1/10796068/e93b452a909b/pone.0293312.g001.jpg

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