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设计类酶催化剂:铑(II)金属肽的案例研究。

Designing enzyme-like catalysts: a rhodium(II) metallopeptide case study.

机构信息

Department of Chemistry, Rice University, Houston, Texas 77005, United States.

出版信息

Acc Chem Res. 2013 Feb 19;46(2):560-70. doi: 10.1021/ar300261h. Epub 2012 Dec 4.

DOI:10.1021/ar300261h
PMID:23210518
Abstract

Chemists have long been fascinated by metalloenzymes and their chemistry. Because enzymes are essential for biological processes and to life itself, they present a key to understanding the world around us. At the same time, if chemists could harness the reactivity and selectivity of enzymes in designed transition-metal catalysts, we would have access to a powerful practical advance in chemistry. But the design of enzyme-like catalysts from scratch presents enormous challenges. Simplified, designed systems often don't provide the opportunity to mimic the complex features of enzymes such as selectivity in polyfunctional environments and access to reactive intermediates incompatible with bulk aqueous solution. Extensive efforts by numerous groups have led to remarkable designed metalloproteins that contain complex folds, including well-defined secondary and tertiary structure surrounding complex polymetallic centers. These structural achievements, however, have not yet led to general approaches to useful catalysts; continued efforts and new insights are needed. Our efforts have combined the attributes of enzymatic and traditional catalysis, bringing the benefits of polypeptide ligands to bear on completely nonbiological transition-metal centers. With a focus on designing useful catalytic activity, we have examined rhodium(II) carboxylates, bound to peptide chains through carboxylate side chains. Among other advantages, these complexes are stable and catalytically active in water. Our efforts have centered on two main interests: (1) understanding how Nature's ligand of choice, polypeptides, can be used to control the chemistry of nonbiological metal centers, and (2) mimicking metalloenzyme characteristics in designed, nonbiological catalysts. This Account conveys our motivation and goals for these studies, outlines progress to date, and discusses the future of enzyme-like catalyst design. In particular, these studies have resulted in on-bead, high-throughput screens for asymmetric metallopeptide catalysts. In addition, peptide-based molecular recognition strategies have facilitated the site-specific modification of protein substrates. Molecular recognition enables site-specific, proximity-driven modification of a broad range of amino acids, and the concepts outlined here are compatible with natural protein substrates and with complex, cell-like environments. We have also explored rhodium metallopeptides as hybrid organic-inorganic inhibitor molecules that block protein-protein interactions.

摘要

化学家们长期以来一直对金属酶及其化学性质着迷。由于酶是生物过程和生命本身所必需的,它们为我们理解周围的世界提供了关键。同时,如果化学家能够在设计的过渡金属催化剂中利用酶的反应性和选择性,我们将在化学领域取得强大的实际进展。但是从头设计类似酶的催化剂面临巨大的挑战。简化的、设计的系统通常不能提供模拟酶的复杂特征的机会,例如在多功能环境中的选择性和对与体相水溶液不相容的反应中间体的访问。许多小组的广泛努力导致了引人注目的设计金属蛋白,其中包含复杂的折叠,包括围绕复杂多金属中心的明确的二级和三级结构。然而,这些结构上的成就并没有导致一般的有用催化剂方法;需要继续努力并获得新的见解。我们的努力结合了酶和传统催化的属性,将多肽配体的优势应用于完全非生物的过渡金属中心。我们专注于设计有用的催化活性,研究了通过羧酸盐侧链结合到肽链上的铑 (II) 羧酸盐。除了其他优点外,这些配合物在水中稳定且具有催化活性。我们的努力集中在两个主要兴趣上:(1)了解天然选择的配体多肽如何用于控制非生物金属中心的化学性质,以及(2)在设计的非生物催化剂中模拟金属酶的特性。本报告传达了我们对这些研究的动机和目标,概述了迄今为止的进展,并讨论了类似酶的催化剂设计的未来。特别是,这些研究导致了不对称金属肽催化剂的珠上高通量筛选。此外,基于肽的分子识别策略促进了蛋白质底物的定点修饰。分子识别能够对广泛的氨基酸进行定点、靠近驱动的修饰,这里概述的概念与天然蛋白质底物以及复杂的、类似细胞的环境兼容。我们还探索了铑金属肽作为阻止蛋白质-蛋白质相互作用的混合有机-无机抑制剂分子。

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